LOCUS       ABU74101.1              1585 aa    PRT              BCT 25-AUG-2017
DEFINITION  Vibrio campbellii ATCC BAA-1116 hypothetical protein protein.
ACCESSION   CP000790-1470
PROTEIN_ID  ABU74101.1
SOURCE      Vibrio campbellii ATCC BAA-1116
  ORGANISM  Vibrio campbellii ATCC BAA-1116
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 2204018)
  AUTHORS   Bassler,B., Clifton,S.W., Fulton,L., Delehaunty,K., Fronick,C.,
            Harrison,M., Markivic,C., Fulton,R., Tin-Wollam,A.-M., Shah,N.,
            Pepin,K., Nash,W., Thiruvilangam,P., Bhonagiri,V., Waters,C.,
            Tu,K.C., Irgon,J. and Wilson,R.K.
  CONSRTM   The Vibrio harveyi Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2007) Genetics, Genome Sequencing Center, 4444
            Forest Park Parkway, St. Louis, MO 63108, USA
COMMENT     Vibrio harveyi belongs to the group of bioluminescent bacteria that
            'glow in the dark,' just as the commonly known firefly. Based on
            their 16S  ribosomal RNA (rRNA) classification, they belong to the
            group of bacteria known as Proteobacteria, which is further
            sub-divided into five groups, including the gamma proteobacteria.
            This group includes many families, one of which is the Vibrionaceae
            (bioluminescent bacteria). One of the Vibrios is a human pathogen
            and causes cholera. Vibrio harveyi can be found globally in marine
            environments, either in a free-living state or in symbiosis with
            marine life.  The sequenced strain is BB120, ATCC BAA-1116
            http://www.atcc.org/common/catalog/numSearch/numResults.cfm
            Sequence/Assembly
            The genome of Vibrio harveyi was sequenced to 8X coverage using a
            combination of plasmid and fosmid end sequences. Additional 454
            sequence reads bring the present coverage to 10.8X. Assembly was
            performed using the PCAP software (Genome Res. 13(9):2164-70 2003).
            The genome has  undergone automated sequence improvement
            (pre-finishing) followed by  manual finishing, and automated
            annotation. The National Science  Foundation (NSF) is providing
            funding for the complete sequence of the  Vibrio harveyi genome.
            
            Annotation
            Coding sequences were predicted using GeneMark v3.3 and Glimmer2
            v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were
            blasted against NCBI's non-redundant (NR) database and predictions
            generated based on protein alignments. RNA genes were determined
            using tRNAscan-SE 1.23 or Rfam v8.0. Gene names are generated at
            the contig level and may not necessarily reflect any known order or
            orientation between contigs.For questions regarding this assembly
            or project, please visit the Vibrio harveyi genome page
            (http://genome.wustl.edu/genome.cgi?GENOME=Vibrio%20harveyi) and
            choose the designated contact person.
FEATURES             Qualifiers
     source          /organism="Vibrio campbellii ATCC BAA-1116"
                     /mol_type="genomic DNA"
                     /strain="ATCC BAA-1116; BB120"
                     /db_xref="ATCC:BAA-1116"
                     /db_xref="taxon:2902295"
                     /chromosome="II"
     protein         /locus_tag="VIBHAR_06209"
                     /inference="similar to AA sequence:REFSEQ:ZP_01477250.1"
                     /note="COG: NOG23215 non supervised orthologous group"
                     /transl_table=11
BEGIN
        1 MGFQFDQEVY LFGAYFERKE TDEGNFFPNW HQESDLTEKT ELDGKIRPIP QTPIMVNAIA
       61 GMDSQLWGTT LEGKIVELGM GEPLSKSAAQ PLNGEKVDGE ETVTEDKENF MILHPGARKE
      121 DIQKDIDYEL SFPPISWLSQ MIAPPDYKDG GASDVATLAE NIKHFATTID GVVDGKRQTG
      181 VKFKLTKIKP SQLAAKYEEE TDGKLSEEQK AYNSWYDKQQ KKPYLQGFIV PRVHTCAVLF
      241 TDPFYAGAEV TLVQPLKQIK PGESESAGET IIATQTVIQR KPRWDDRIEN NVLPSALLHL
      301 DPIDAKDGFY LIRVAFREQE WLEFEKELYQ RLKLPESVIR ANVKKSKAFI GNTDEVQDVY
      361 TYELHERLIF KETAGIGKMA CVCGDMITLE ETLIQQFPSQ LPEYSVYASK GVTYHNQSKP
      421 GLASLSLSSA IMKTYDSLSS DFLSIEGAKV YGTFGDMAKT IGQALWENAE AGNLPDFIMS
      481 GLSLKAAFAA CKDAQQTIDI SKTLVALPLS VKDYRKLILK KTVINIPYIK QAFKDNGQTK
      541 IFRGLGRLSK DFLSGTNQAL PVIQLGLSAM ETKEQYDKHI DALEDADQAH GSLKAYAQQY
      601 LSAIAYLRRS DEKERWETKA TEVQGFLGNE AKIYTDAMGV VVRINFKFNS AEFENEVKAL
      661 NSNYEELCKK LRNLLVENPD YQIALIGHGG PISSQEKNLI VSQRRIDTIK DRILNGTQGD
      721 ERIKLERRLV TQAKGKAELL PKEGGYHDHG DRSDTADIAI NRRVEVRLVI PDFSISLPPS
      781 RTGTLALNRA HQYWEGFKIT AKEAQKEAFF SAIDVLATVA LWTPASPIAA YYLAGSTAGK
      841 LLGAATDFYG DLFGDQTFKK LKDTYNTKSM LKTLSMINQE LIVLYEEVDT KLEQKELKPS
      901 EIAGFLESQV NHDELLKRFL LRAYALNSLV ELLAILSSMD GVLRSFDNLI EQYEVDLFIE
      961 QYVMSDNWSI PVNMGNTLAL NWINRKKAFN SSLSHTVSSL AFDQGRQVHG SFNTGFPVQS
     1021 QLYLNDKTAD MIDINLAKKE GLKAFCNDFN LTKVELEEKD IGFSRLLVKE GNNWQPYVDW
     1081 VREESGRKLR PQTRVMLQVI LTGEGEHHSK SMFLREVSYS TEVIGFNTNC PAFDVLFTKK
     1141 NAQELQDPDG AVAKYFEQQP QLQEEELELH SLEFEPTYTF GHVYIHGLKP LCPYVKGIDS
     1201 LKALIKGQSV FEHVLDNDGF DQMEYTFSLA KHDLALGVRM VGTNNQFRLE YLTAKYGTSK
     1261 ASSPQKSHFD GQIEVLSQFE DTDFLIEDFV MSESSSARDN TPQVIGDQLT VLQGIEIDGQ
     1321 LKWGEDWTEQ ALASEFDWNK ETSFAVCFAL FGDELASQEY ETMRLNWREL MMKLKLKDGP
     1381 TIHSAMHYCG EMSIATHTTV VPSNNNYNGM QNEIVFKLAH DKTQSTHNHD DLAQSAIDFL
     1441 QDNTAQYSQS LKSSDRKHVY IVRFKFTYVS PTGTLVDGMR PYGDIIAGKN LKPLTVTFES
     1501 LQQSALNEGY PLPGIDVRLP PIKDYMDKPW TRILNEKEPS SISVRNHWGN LESPEQKREF
     1561 VNKWITEQGL SLKAPQVELL QIKEI
//