LOCUS       ABU73856.1              1019 aa    PRT              BCT 25-AUG-2017
DEFINITION  Vibrio campbellii ATCC BAA-1116 hypothetical protein protein.
ACCESSION   CP000790-1225
PROTEIN_ID  ABU73856.1
SOURCE      Vibrio campbellii ATCC BAA-1116
  ORGANISM  Vibrio campbellii ATCC BAA-1116
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 2204018)
  AUTHORS   Bassler,B., Clifton,S.W., Fulton,L., Delehaunty,K., Fronick,C.,
            Harrison,M., Markivic,C., Fulton,R., Tin-Wollam,A.-M., Shah,N.,
            Pepin,K., Nash,W., Thiruvilangam,P., Bhonagiri,V., Waters,C.,
            Tu,K.C., Irgon,J. and Wilson,R.K.
  CONSRTM   The Vibrio harveyi Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2007) Genetics, Genome Sequencing Center, 4444
            Forest Park Parkway, St. Louis, MO 63108, USA
COMMENT     Vibrio harveyi belongs to the group of bioluminescent bacteria that
            'glow in the dark,' just as the commonly known firefly. Based on
            their 16S  ribosomal RNA (rRNA) classification, they belong to the
            group of bacteria known as Proteobacteria, which is further
            sub-divided into five groups, including the gamma proteobacteria.
            This group includes many families, one of which is the Vibrionaceae
            (bioluminescent bacteria). One of the Vibrios is a human pathogen
            and causes cholera. Vibrio harveyi can be found globally in marine
            environments, either in a free-living state or in symbiosis with
            marine life.  The sequenced strain is BB120, ATCC BAA-1116
            http://www.atcc.org/common/catalog/numSearch/numResults.cfm
            Sequence/Assembly
            The genome of Vibrio harveyi was sequenced to 8X coverage using a
            combination of plasmid and fosmid end sequences. Additional 454
            sequence reads bring the present coverage to 10.8X. Assembly was
            performed using the PCAP software (Genome Res. 13(9):2164-70 2003).
            The genome has  undergone automated sequence improvement
            (pre-finishing) followed by  manual finishing, and automated
            annotation. The National Science  Foundation (NSF) is providing
            funding for the complete sequence of the  Vibrio harveyi genome.
            
            Annotation
            Coding sequences were predicted using GeneMark v3.3 and Glimmer2
            v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were
            blasted against NCBI's non-redundant (NR) database and predictions
            generated based on protein alignments. RNA genes were determined
            using tRNAscan-SE 1.23 or Rfam v8.0. Gene names are generated at
            the contig level and may not necessarily reflect any known order or
            orientation between contigs.For questions regarding this assembly
            or project, please visit the Vibrio harveyi genome page
            (http://genome.wustl.edu/genome.cgi?GENOME=Vibrio%20harveyi) and
            choose the designated contact person.
FEATURES             Qualifiers
     source          /organism="Vibrio campbellii ATCC BAA-1116"
                     /mol_type="genomic DNA"
                     /strain="ATCC BAA-1116; BB120"
                     /db_xref="ATCC:BAA-1116"
                     /db_xref="taxon:2902295"
                     /chromosome="II"
     protein         /locus_tag="VIBHAR_05963"
                     /inference="protein motif:HMMPfam:IPR001036"
                     /note="KEGG: eci:UTI89_C2351 1.5e-63 yegO; hypothetical
                     protein YegO K07789; COG: COG0841 Cation/multidrug efflux
                     pump; Psort location: CytoplasmicMembrane, score:10.00"
                     /transl_table=11
                     /db_xref="InterPro:IPR001036"
BEGIN
        1 MSIAEYSIKN KVISWLFIVI LAIGGVTSFL ELGRLEDPAF TIKDAMVIAT YPGATSKEVE
       61 EELTYPLEKE IRKLPYIDKI TSTSSSGMSQ IMVSMKMDYG PDELPQIWDE MRRKINDLQP
      121 TLPQGVQSLQ IIDDFGDVYG VMLMLTGDDY DYVELKRYAD QLTRELELID GVGKVDIAGD
      181 QQEMLFVEIS LDRLAALNLD MNVISGLLNQ QNNVVSAGEV MVNGESLIIR PSGTLNTVEA
      241 LENLIIHGRD TGNLIRLKDV ATISRGIQEQ PGNVLLYNGK KAINIGISFA SGVNVVEVGQ
      301 RIDAELASLE TIKPAGIDMN YFYNQSQEVD DSVKAFVISL AEAVAIVIIV LLFTMGLRSG
      361 VIIGLVLLLT VFGTFILMNY NNIELHRISL GALIIALGML VDNAIVVVEG ILVGLKKGRT
      421 KVQAATDIVR QTQWPLLGAT VIAITAFAPI GLSQDATGEF MGSLFWVLCF SLFLSWITAI
      481 TLTPFLADLL LKEEDKSSDA EDEDPYKGWL FVAFGASLKL ALRFRWLTVT GMVALLVGAV
      541 VAFGSVKQQF FPPSNTPMFY VDMWMPEGTD IRETIKKAEE VESYIRTQDD VDFVSASIGQ
      601 GLQRFALTYQ PEKSYEAYAQ FQVRTTDREK MFKLLYKLDD SLAKTFDKPT FQFKLMEFGP
      661 SPASKIEARI TGPDPQVLRD LAVQVEDILH TDPGARNIRH DWRERTKELV PVFNESKARR
      721 LGISKEDLSS TLQMAFGGST LGFLRDGTHI LPIMTRLPEA ERVDFESLQN VNIWSPSLQS
      781 YIPVDQVIDG VKLDWDEPLI QRRDRKRTLT VLADHDVLSD DTAASLFARV QPKVMALHIP
      841 EGYEITWGGE YESSKDAQEG LFGSLPMGYL LMFIITMLLF NSLKKPLVIW FTVPLSIIGV
      901 SFGLLTTNMP FSFTAFLGLL SLSGMILKNG IVLLDQINLE LASGKDPYLA IVDSAISRVR
      961 PVSMAALTTI LGMIPLVFDA FFGSMAITIM AGLGFATVLT LIVVPVMFAI LFKIKPTTA
//