LOCUS ABO50867.1 1081 aa PRT BCT 28-JAN-2014
DEFINITION Desulforamulus reducens MI-1 S-layer domain protein protein.
ACCESSION CP000612-2315
PROTEIN_ID ABO50867.1
SOURCE Desulforamulus reducens MI-1
ORGANISM Desulforamulus reducens MI-1
Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae;
Desulforamulus.
REFERENCE 1 (bases 1 to 3608104)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Desulfotomaculum reducens MI-1
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3608104)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000266
Source DNA and bacteria available from Bradley M. Tebo
(tebo@ebs.ogi.edu)
Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Desulforamulus reducens MI-1"
/mol_type="genomic DNA"
/strain="MI-1"
/type_material="type strain of Desulfotomaculum reducens"
/db_xref="taxon:349161"
protein /locus_tag="Dred_2357"
/note="PFAM: S-layer domain protein domain protein; KEGG:
swo:Swol_0141 hypothetical protein"
/transl_table=11
/db_xref="InterPro:IPR001119"
BEGIN
1 MVEKIKNKLF IQLLIILLLL TLMPMAVLAQ DSDIKGHWAE NQLSGWVQSG LAKGYEDGQF
61 KPDNNITRAE FVALVNRSFG FTEIIEFNFS DVKANDWFAG EIGKAIAAGY ISGYQDGTMK
121 PNNQITRQEV ASIISRLLKL DAGSGFNINN FKDAKDMPQW SKAAIGAVSS KGYMGGYSDQ
181 TFKPTKPITR AEAIVSLDRV KGQQATAAEK TVFYAKPGTY GPATGRETIN GNVTISVADV
241 TLQNTTISGD LLLAEGVGNG DVKLKNVKVS GKTIIKGGGA NSVTLEDCSL PNITVSKEGV
301 RVVASGNTTV KVVRLESGAT LVETTTTGPG FEAVTLSEII PASAKVNLTG NFAAVIVATK
361 EVEVEVTAGQ IETLEVAKEA IGAIVNVAKD ATVNTLTANA AAKVTGEGKI ETAKVNAANV
421 SIAQTPTKRE VANGVTSSIG GQTVSGGTSS TGGGGGGSGG SSTTTKYEVA VLTNPEAGGT
481 VSGGGSYTQG VAVTVTAIAN PGYKFIDWKE NGIQVSTNAS YSFTMGSAAK TLVANFITEV
541 PVEPAPFTPG EGGTLPDFTP FSSEPGKIGG LYVDRTHRVN EGFIYNGGEL GNYAVVDLKF
601 DPPSEYGATS YTLQYSDDGS TWRNYQHYDV DLTTSNNAQD NFSLSSPAGS YKYRLLVNGG
661 DRDGYTSNEV EAPLVAVATT FSGWGLDESM WITGVMSPFV GSGKQASFDV KKLPEHDNTD
721 LSQYLTYQWY RVNPATFTMT AIEGATELTY TTSEADAGYL LLCRATGDGV NVGGFIQILS
781 HWSPVITNKA YVNNVTNDGF TLNLDKSLAG LTPEEVKLSY YAGNNEIIVP INSITPRDNT
841 AMFDIAAAIP QGVSELYLHN TSDFWRLVSV QGGHQGHMME GVRITLGAPA DPAADIAVTL
901 ESTEMSVPYH LGVRVKDAAT GAPITDLVAG DLDEDSSLVF NFSLEKDGVN IPLQRVFHNE
961 MNNEENEGHY VIYPSDDYRP MAGEYKLTFS KTGYVTTSLD CSFPLEDTNA NMLVTLENTD
1021 VETIPNNLSV EEINTITDVP ITDPVADELT NPVTDELTDP VTDELTNSIT DELTDSIPLV
1081 D
//