LOCUS       ABO50856.1               670 aa    PRT              BCT 28-JAN-2014
DEFINITION  Desulforamulus reducens MI-1 DNA ligase, NAD-dependent protein.
ACCESSION   CP000612-2304
PROTEIN_ID  ABO50856.1
SOURCE      Desulforamulus reducens MI-1
  ORGANISM  Desulforamulus reducens MI-1
            Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae;
            Desulforamulus.
REFERENCE   1  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Complete sequence of Desulfotomaculum reducens MI-1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4000266
            Source DNA and bacteria available from Bradley M. Tebo
            (tebo@ebs.ogi.edu)
            Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu)
                 Paul Richardson (microbes@cuba.jgi-psf.org)
            Quality assurance done by JGI-Stanford
            Annotation done by JGI-ORNL and JGI-PGF
            Finishing done by JGI-LANL
            Finished microbial genomes have been curated to close all gaps with
            greater than 98% coverage of at least two independent clones. Each
            base pair has a minimum q (quality) value of 30 and the total error
            rate is less than one per 50000.
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES             Qualifiers
     source          /organism="Desulforamulus reducens MI-1"
                     /mol_type="genomic DNA"
                     /strain="MI-1"
                     /type_material="type strain of Desulfotomaculum reducens"
                     /db_xref="taxon:349161"
     protein         /locus_tag="Dred_2346"
                     /EC_number="6.5.1.2"
                     /note="KEGG: chy:CHY_1100 DNA ligase, NAD-dependent;
                     TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain
                     protein; zinc-finger, NAD-dependent DNA ligase C4-type;
                     NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA
                     ligase, adenylation; SMART: Helix-hairpin-helix
                     DNA-binding, class 1; NAD-dependent DNA ligase-like"
                     /transl_table=11
                     /db_xref="InterPro:IPR001357"
                     /db_xref="InterPro:IPR001679"
                     /db_xref="InterPro:IPR003583"
                     /db_xref="InterPro:IPR004149"
                     /db_xref="InterPro:IPR004150"
                     /db_xref="InterPro:IPR013839"
                     /db_xref="InterPro:IPR013840"
BEGIN
        1 MADLSQQSKA RVEALRREIN HHNYQYYVLD QPTITDAQYD QLMQELLRLE ERHPELVTPD
       61 SPTQRVGGQV QRGFSSVPHK IPMLSLGNAF GEGDLREFDR RVRSYLPGEE VKYVVELKID
      121 GLAISLWYEK GLLVRGATRG DGELGEDITI NLKTIRAIPL RLTQEVPFLE VRGEAYMPKD
      181 SFVRLNEARE EAGEPLFANP RNAAAGSLRQ LDPKITAARN LSVFMYAIGY IEGAKPPSHA
      241 ESLAWLKELG IRINPDHQVC GSIDEVIDFI SQWQAKRYQL PYAIDGMVIK VNSLEQQQRL
      301 GTTMKSPRWA IAYKFPAEQA VSTIKDIIIR VGRTGVLTPT AILEPVQLAG TTVSKATLHN
      361 EDIIRQKDIR IGDKALVQKA GDIIPEIVQV YPEKRTGNEV PFILPVTCPE CGAEVVRVAG
      421 EAAHRCTNEN CSAKSREGII HFVSRSAMDI MGLGEGIVNQ LIKGGLVKDP ADLYDLKYED
      481 LIRQERMGAR SSQKLLAAIE ASKNNSLGQL LFGLGIRHVG ERAAKILARQ FGSMQALMQA
      541 TAEDLTGISE IGPRIAESIM EYFSRQENQG LIERLSKAGV NMLEEVEQTE STDQTLSGKT
      601 FVVTGTLEGF SRQEAQRAIE ERGGKVSGSV SKKTNYVVVG ENPGSKHDKA RQLGITILTE
      661 QDFVKLLQQQ
//