LOCUS       ABO50502.1               710 aa    PRT              BCT 28-JAN-2014
DEFINITION  Desulforamulus reducens MI-1 DNA topoisomerase I protein.
ACCESSION   CP000612-1950
PROTEIN_ID  ABO50502.1
SOURCE      Desulforamulus reducens MI-1
  ORGANISM  Desulforamulus reducens MI-1
            Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae;
            Desulforamulus.
REFERENCE   1  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Complete sequence of Desulfotomaculum reducens MI-1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4000266
            Source DNA and bacteria available from Bradley M. Tebo
            (tebo@ebs.ogi.edu)
            Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu)
                 Paul Richardson (microbes@cuba.jgi-psf.org)
            Quality assurance done by JGI-Stanford
            Annotation done by JGI-ORNL and JGI-PGF
            Finishing done by JGI-LANL
            Finished microbial genomes have been curated to close all gaps with
            greater than 98% coverage of at least two independent clones. Each
            base pair has a minimum q (quality) value of 30 and the total error
            rate is less than one per 50000.
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES             Qualifiers
     source          /organism="Desulforamulus reducens MI-1"
                     /mol_type="genomic DNA"
                     /strain="MI-1"
                     /type_material="type strain of Desulfotomaculum reducens"
                     /db_xref="taxon:349161"
     protein         /locus_tag="Dred_1984"
                     /EC_number="5.99.1.2"
                     /note="KEGG: mta:Moth_1026 DNA topoisomerase; TIGRFAM: DNA
                     topoisomerase I; PFAM: TOPRIM domain protein; DNA
                     topoisomerase, type IA, central domain protein; DNA
                     topoisomerase, type IA, zn finger domain protein; SMART:
                     DNA topoisomerase I, ATP-binding; DNA topoisomerase I,
                     DNA-binding; Toprim sub domain protein"
                     /transl_table=11
                     /db_xref="InterPro:IPR000380"
                     /db_xref="InterPro:IPR003601"
                     /db_xref="InterPro:IPR003602"
                     /db_xref="InterPro:IPR005733"
                     /db_xref="InterPro:IPR006154"
                     /db_xref="InterPro:IPR006171"
                     /db_xref="InterPro:IPR013497"
                     /db_xref="InterPro:IPR013498"
BEGIN
        1 MSKTLVIVES PAKAKSIGKY LGKNYTVKAS MGHVRDLPKS QFGVDVENAF SPKYITIRGK
       61 GDILKELRSA VKKVDHVLLA SDPDREGEAI AWHLTKLLEI DEETPCRIEF NEITKNAIQA
      121 AVKQPRRIDV DRVNAQQARR ILDRLVGYNL SPLLWRKVKK GLSAGRVQSV AVRLICDREE
      181 EIQAFIPEEY WTLTGKFLKS AKSPFEAKLH KHKNKKIVIP NQETMDKILA ELKGAAYVVS
      241 NVTRKERLRN PAPPFTTSSL QQEASRKLNF TSRKTMVVAQ QLYEGIDLGK EGPVGLVTYI
      301 RTDSTRVSET AIEETRSFIM ERFGPAYVPK QPRQVVAKGK VQDAHEAIRP TSVNRDPDSI
      361 KQYLTNDQFK LYKLIWSRFL ASQMASAVID TTSMDISAGD YLFRATGSII KFPGFMQVYI
      421 EGNDDGHKEE ESVLPELAKG DKVQAKDLTP KQHFTQPPPR YTDATLVKVL EEKGIGRPST
      481 YAPIVETIQR RGYVVRENKQ FYPTELGVIV VDLLKNHFPE IINVEFTADM EKKLDQIAEG
      541 EQQWAGVLRD FYEPFSQTLE TAEEAIGKVQ VADEVSEEIC EQCGRNMVIK LGRYGKFLAC
      601 PGFPDCRNTK PLLEPTGVGC PKCEGEMVLR RSKKGRKFYG CSRYPECEFV TWDMPTKEKC
      661 TQCGEMMVEK KSRGKEKVLQ CVNEHCPSKG EKAASNINGN KKKTVKNNKK
//