LOCUS ABO50478.1 384 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 NusA antitermination factor protein. ACCESSION CP000612-1926 PROTEIN_ID ABO50478.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_1960" /note="KEGG: chy:CHY_1769 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; NusA N-terminal domain protein; SMART: KH domain protein" /transl_table=11 /db_xref="InterPro:IPR003029" /db_xref="InterPro:IPR004087" /db_xref="InterPro:IPR004088" /db_xref="InterPro:IPR010213" /db_xref="InterPro:IPR013735" BEGIN 1 MNSEFLEALR DLEKEKGIAV DVLLEAIEAA LLSAYKRNFG SLQNARVHID RDTGDYKVYS 61 QRAVVEEVED DRVEISLEDA RKIDPRFNLE DVVEDEVTPR NFGRIAAQTA KQVVVQRIRE 121 AERNIIFEEF SNREGDILTG IVQRIENKNV FIELGKTEAI LTPSEQIPNE DYRHGDRLKT 181 YIVEVRKTTK GPQILVSRTH PGLLKRLFEL EVPELQEGVV ELKSIAREAG YRSKIAVYSK 241 DENIDPVGAC VGPKGMRVQN IVTELNGEKI DIIKWNQDPS KYVASSLSPA KVVAVEVWED 301 EKVARVIVPD YQLSLAIGKE GQNARLAAKL TGWKIDIKSE SQMTDIYPEY DAEENDGFST 361 DDNYLETFED EYKHVDSSEE KNGE //