LOCUS ABO50442.1 532 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 ATP-dependent RNA helicase DbpA protein. ACCESSION CP000612-1890 PROTEIN_ID ABO50442.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_1921" /EC_number="5.99.1.-" /note="PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: dsy:DSY1954 hypothetical protein" /transl_table=11 /db_xref="InterPro:IPR000629" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR005580" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014014" /db_xref="InterPro:IPR014021" BEGIN 1 MNHRKETKLF GNLELDRRIV DGLKEMGFEE PTPIQQLAVP QVLAGYDMIG QAQTGTGKTA 61 AFSIPMIERL NPRKREVQTI IITPTRELAI QVAEEISKIG RFSRIKVLPI YGGQSIERQI 121 RSLRLGVQVV VGTPGRLLDH LRRQTLKVDQ VDMVILDEAD EMLDMGFIED IEEIIRHTPA 181 ERQTLLFSAT MPQEIIRLAQ QYMTDPKYVT VSKTNLTVPQ IEQVFYEAPE KNKLEALCRI 241 LDISDISQGI LFCRTKRGVD ELVAGLQARG FAAAALHGDL SQQQRNTVMR QFRSSEVELL 301 VATDVAARGL DIEGVSHVIN YDIPQDPEFY VHRIGRTGRA GRSGVAITII SPREYRQLRQ 361 IENITKTHIK RQKLPSIADV VERQKESIKE RLIQIINEGK LGYYRSVVDA LVDEYDPMDI 421 AAAALKLSMD LEPNSEDVNL NTVNFGNTGA RPGMVRLFLT LGRKDRVTPP EIIKLVSDES 481 GISGGQIGNI NIYENFSFVE VPEDWANCVI SCLHRQHFKG RRIFVEPARA RK //