LOCUS ABO50301.1 698 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 putative PAS/PAC sensor protein protein. ACCESSION CP000612-1749 PROTEIN_ID ABO50301.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_1776" /note="KEGG: swo:Swol_1487 sigma-L-dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein; sigma-54 factor, interaction domain-containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase" /transl_table=11 /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000644" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" BEGIN 1 MVEVKLRDIM TRKPIVLTPE QTVQEVAEIF LNHQVDGAPV IDSNGNIIGL FTKSQIFKLV 61 SQGLSVQTTI ATLIRRDVNN NSNDDVEEIL MQESGRFPLT EGQAFADMKT RTNLLSAFNN 121 FYQDVSCEFA TIINSIHDLI VSVDEEGRIK VFNRSAEKFF GKTLQEVKGK KINELFPNIG 181 LMDVIQSGKV EKIHKVLLNN QYFIINKFPV KMNDKITGAV AVFQQFSELE SISGELKSVK 241 ELNQEFDAII QSSFDGLFIT DGNGITLRTN KAFERITGAD ASTLLGRHIE DLIDEGIVSE 301 SVTSLVLKQR ETVTIMQKTQ IGKITLATGN PVFDENGNVF RVVCNIRDIT ELNLLKQELE 361 QARGLRLHYE RQLRSLGIHY PGSDKMVVNS AKMKDLMGLI MRLAEVNSTI LITGESGTGK 421 ELIAETLHKN SPRQDGPFIK VNCGAIPENL LESELFGYEY GAFTGAKKQG KAGYFELAMG 481 GTLFLDEIGD LPLNLQVKLL RVLQSREIVR VGGEKPLKID ARILAGTNRN LIEMVRHKEF 541 REDLYYRLNV VPVNVPPLRE RKEDIPALVT HFVLMFNLKY KLNKRISREV IDIFLRYNWP 601 GNVRELENLI ERLVVVTPRD LLTREDLPPN LGGSTPESLP VQVSGLMPLK DAVEYVEKQV 661 LERAYAECRT TRQMAKALKV DASTIVRKAA KYGISKAQ //