LOCUS ABO50246.1 582 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 sigma54 specific transcriptional regulator, Fis family protein. ACCESSION CP000612-1694 PROTEIN_ID ABO50246.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_1719" /note="KEGG: bca:BCE_2865 sensory box sigma-54 dependent DNA-binding response regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase" /transl_table=11 /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR002197" /db_xref="InterPro:IPR003593" BEGIN 1 MGIHHKFYPR AIDMYSLPVQ EIDETVSVLE GQRLLESGLL GGLLLQKSDQ YFVIMPSDIF 61 CAAETDSLSK RAWRPALFIT EDCTMTELLK QWGKAPTAIP VVNNTSNKPI GLLEPLSVAN 121 EIYAGFVKLR CFFETVLDQV NESICGIDKL HRVMIWNPKA EELYNVKAEK ILSGRIEDFF 181 SNLRISNCMH EKKEVRGLYH QPCEGAHVLI NSAPVFDSGK VIGGLAVEKD ITEIVQLNQE 241 LNKASTQVKL LEQEIRKISG QDCAFNKLIG RSEAIQKLIV FGKKISVTEA TVLLRGESGT 301 GKELLARAIH QNSPRHMNPF IVVNCGAIPN NLFESELFGY EGGAFTGADR KGKPGMFELA 361 NGGTLFLDEV GEMPIEMQAK LLRVLQEGTF YRVGGSQSVH VNVRVLAATH RNLEDMINRR 421 QFREDLYYRL NVVALEIPPL RDRREDIPEL VHLFMQEFCQ KYDKNIKKIE PAVMTAFLDY 481 TWPGNVRELK NAVERLVVLT DGDIIDEAAL PENLRRNTYI SLVTSPVSQG KLMNVAVEAE 541 KQLILKTLQQ VRGNRSEAAR VLGIPRSTLY YKLRQLGIPA KG //