LOCUS ABO50166.1 782 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 DNA mismatch repair protein, MutS family protein. ACCESSION CP000612-1614 PROTEIN_ID ABO50166.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_1638" /note="KEGG: sth:STH1115 DNA mismatch repair protein; TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein" /transl_table=11 /db_xref="InterPro:IPR000432" /db_xref="InterPro:IPR002625" /db_xref="InterPro:IPR005747" /db_xref="InterPro:IPR007696" BEGIN 1 MERTIKRLEF DKVLERLASH AQSELGKQRV EELKPSTNME DIKRWQAETS EGRELLRLDP 61 LAELAGWHDI RQALTRASRY AVLSAEELFA VGETLAASRQ IKKFFSEKTD RYPLLSELAE 121 SLTNQAQLEK NILQAVLPGG EIADDASPEL LQIRRGIQRS QNRIRERMEN IIRSSDNQKY 181 LQDPIITIRN DRYVVPVKQE YRNQIPGIVH DQSASGATLF VEPMAVVEAN NEVRQLVAAE 241 KQEIQRILGQ LSQEVSGVHE DISIALETLG DLDFIMAKAR YSLKLNAWSP KILAGPMIDI 301 KKGRHPLLPG DAVPATISLG KAFKTLVITG PNTGGKTVTL KTVGLFSLMT QAGLHIPAEA 361 GTEMGVFKQV FADIGDEQSI EQSLSTFSSH MTNLVRILDR AGEGSLVLMD ELGAGTDPTE 421 GAALARAILE ELHQRGACTL ATTHYSELKN YAYATPGVEN ASVEFDVETL RPTYRLLIGR 481 PGRSNAFEIS ARLGLRREII ESARGFLTTE QVEVAELISR LEKTQQAAEK DRQEAALLRR 541 ESEQLKERYH ALEQDLRAKK EAILVKAHEE ASRMVRQARL EAEDTVKELR SRLAEESAKN 601 REQAIHHARN KLQQVTSKVA AKTPKRTADG EIPRQVKPGE EVFLPKYNQK AYVVGVSGNN 661 VQVQVGIMKM SVPMQELRTV KEVKVTSGQS KVGQVLMDKA QHIGTSLDLR GMTADEAMLE 721 IEKYLDDAFL AGLSSVTLVH GKGTGALRTS VQRELKNHPR VKTFRLGEAG EGGSGATVVT 781 LK //