LOCUS ABO50072.1 568 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 sigma54 specific transcriptional regulator, Fis family protein. ACCESSION CP000612-1520 PROTEIN_ID ABO50072.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_1544" /note="PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: chy:CHY_1333 putative sigma-54-dependent transcriptional regulator" /transl_table=11 /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR002197" /db_xref="InterPro:IPR003593" BEGIN 1 MTYSGVITSA INSLKNLLPC QVTLWYQRKI IYTSLPNPLS QLNDWPIIEE AKRQNSAIMI 61 NSPRQHHLCA QCPVIDMCSL ALELFFPFAE NSLTSGSGLC LQFPLESLTS MQVMGLNQWL 121 RHLKSYARYF EFLIKEGVYK QKELLHTQQL NYLLSLVPEG IVLLDEQKKI STLNERAEQL 181 NLAHHYHHKR DLKDIHTQGH QFNSALSPIQ IKVKNFYQDK KFIGAICHTQ NFDTISPLPQ 241 RTQRSPVFPG IIGKGPALQK ILEIIKQVAK SESTVLLRGE SGTGKELFAH SIHELSSRNS 301 GPFVAINCAA IPEALLESEL FGYEEGSFTG ARKGGKPGKV ELANNGTLFL DEIGDMPLTL 361 QAKLLRVIQE KNIEPVGCSY PLPINVRLIA ATHRNLEEMI GTGTFREDLF FRLNVIPIFI 421 PPLRQRPEDT ELLLHYYLRK YCILLKKPFK ILSYAALQQL VKYHWPGNIR ELENLVEYLV 481 NIHNQDIISP EDLPITIQQP IKEENQPIGI QPVEPQTRKS SGQRSQAELI QMLNRFGWHT 541 DGKKKAAAAL GVSLATLYRR IKKYKLKE //