LOCUS ABO49730.1 818 aa PRT BCT 28-JAN-2014
DEFINITION Desulforamulus reducens MI-1 virulence-associated E family
protein protein.
ACCESSION CP000612-1178
PROTEIN_ID ABO49730.1
SOURCE Desulforamulus reducens MI-1
ORGANISM Desulforamulus reducens MI-1
Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae;
Desulforamulus.
REFERENCE 1 (bases 1 to 3608104)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Desulfotomaculum reducens MI-1
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3608104)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000266
Source DNA and bacteria available from Bradley M. Tebo
(tebo@ebs.ogi.edu)
Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Desulforamulus reducens MI-1"
/mol_type="genomic DNA"
/strain="MI-1"
/type_material="type strain of Desulfotomaculum reducens"
/db_xref="taxon:349161"
protein /locus_tag="Dred_1196"
/note="PFAM: virulence-associated E family protein; KEGG:
bca:BCE_0384 virulence-associated protein E"
/transl_table=11
/db_xref="InterPro:IPR007936"
BEGIN
1 MNSDPNKKVK LKIKHDGNIS IAVGRSRKET NWKNKDMLWS AMVDRLSRTN RTGETFAEYK
61 KLSKSQQGQI KDVGGFVGGT LKSGRRKSEN VAWRHLITLD IDYAKGDFWA SVTVILGCAC
121 VLYSTHAHCP EAPRLRLVIP LKRPIAPDEY PAVARRIAAD LGIDFFDDTT YDPVRLMYWP
181 STSADGEFVF KYLDEPWLDP DEVLARYEDW RDPSYWPESS RAQQARQKLA DRQGDPLEKP
241 GVVGAFCRTY SIPEAIETFL IDIYGPAGEG RYTYLPGSTT GGLVLYDGDK FAFSHHGTDP
301 ISGRLVNSFD LVRLHKYGDQ DESAEPGTPT VKLPSYLAMT DFAIEDPNVK STMGKDILVR
361 AQEDFADDDD WTQHLEYTKK KELKTSLKNL VLILRHDPNL KGIAYNAHKG AITLLEKVPW
421 RKPGDWKGPN WSDDDDAALR VYLEKVYEIW TPSKLNDALT AVSHERSFHP IRDYLNGLDE
481 WDGIPRLEEV LIDYLGAEDS VYTRAVTKKT FVAAVARVMN PGCKFDYMLV LIGKQGLGKS
541 TLFTRLAGNW FNDSLSMSDM RDKTAAEKLQ GYWILEIGEL AGFKKAEVEV VKSFLSRQKD
601 IYRPSYGRRT IEYPRQCVIV GSTNNDTGFL RDSTGNRRFW PVNVTGVSTD RAPWAMNDYT
661 VGQIWAEALA CYKAGETLYL EGKAAEEAFE QQKLAMEADE RLGMVKEYLD MLLPENWEEM
721 SLTERRTFIN GGDFGHGPEG TMQRDKICVA EIWCELMGKE LTGIKRFEID EIHGLMRQID
781 GWEKYTGNKD GKMKFNLYGV QRAYIRKDSA KFSETKNE
//