LOCUS ABO49210.1 457 aa PRT BCT 28-JAN-2014
DEFINITION Desulforamulus reducens MI-1 UDP-N-acetylmuramoyl-tripeptide-
-D-alanyl-D- alanine ligase protein.
ACCESSION CP000612-658
PROTEIN_ID ABO49210.1
SOURCE Desulforamulus reducens MI-1
ORGANISM Desulforamulus reducens MI-1
Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae;
Desulforamulus.
REFERENCE 1 (bases 1 to 3608104)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Desulfotomaculum reducens MI-1
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3608104)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000266
Source DNA and bacteria available from Bradley M. Tebo
(tebo@ebs.ogi.edu)
Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Desulforamulus reducens MI-1"
/mol_type="genomic DNA"
/strain="MI-1"
/type_material="type strain of Desulfotomaculum reducens"
/db_xref="taxon:349161"
protein /locus_tag="Dred_0671"
/EC_number="6.3.2.10"
/note="TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM:
cytoplasmic peptidoglycan synthetase domain protein;
cytoplasmic peptidoglycan synthetases domain protein; Mur
ligase, middle domain protein; KEGG: chy:CHY_2073
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
ligase"
/transl_table=11
/db_xref="InterPro:IPR000713"
/db_xref="InterPro:IPR004101"
/db_xref="InterPro:IPR005863"
/db_xref="InterPro:IPR013221"
BEGIN
1 MLTYTIEEIA QVIGGTLLQG DPVTKIKGIH TDSRRAKPRE LFVALQGQQA DGHDFARKAI
61 EQGASALLVS REITGIAPQI PVVLVKNTLQ ALQQLASHNR SRLNIPVVAV TGSNGKTSTK
121 DMIAAVLNTR FKTLKTEGNF NNELGLPLTL LGLGEEHQVA VVEMGMRGPG EIDFLAGLAK
181 PTGAVITNIG EAHLERLGSV ENIALAKTEV LAHIGRDGFA ILNADSPYLG ELARNCQGKV
241 WLYSLEGIGD LQASNIRPEG TGVRFNISSP GGKEEIYLPV PGSHNVMNSL AAIGVGLQLG
301 LQLEEIAQGL AQLCLTHSRL QILSSNGRVI INDTYNANPS STKAALKVLK ETARSRKIAV
361 LGNMYELGDL EQSGHQEVGE AAAAIPVDYL ISVGNLAQWI TQGGLKGGLS QERVFQCQEN
421 SEAVEVLGKI LKPGDTILVK GSRGMHMEYI VREIMKD
//