LOCUS ABO49083.1 783 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 CRISPR-associated helicase, Cas3 family protein. ACCESSION CP000612-531 PROTEIN_ID ABO49083.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_0539" /note="KEGG: mst:Msp_0422 predicted helicase; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like" /transl_table=11 /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR006474" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" BEGIN 1 MTEQLKSHPH LFLHQHIEQV NQATKAIRDW HTTDTITNDI KLLLGHLAKY HDLGKGTPAF 61 QEYIENPEGY QGDPQEKAHS TLSLLLTLAI ARQQSWEELH TLVIAAAVAG HHSRLPTIPE 121 KKIGGVCCPQ WDIDGFAGGE KASLLKRQLA SIDFPALEQE TKVEFGSYGL AQALQSDPAK 181 SLREMKRFLI TRIYGIFASL SLEEALRLRM KAQLLYSVLL EADKALLAVS SPEVYLNREV 241 RHWQSRWVED KIGKPPETSI NQLRQRARQG VIAALEAKNT NLYSLTAPTG CGKTMLAATW 301 ALKLRERVTE GQAPPKIIIV LPFLSVIDQT AREYARLLSH SGQETDGRWL IQSHSLADRH 361 YARGLEDEDG RFFIDTWRSE IIITTYDQFL MSLLDPRAKY QMRFHNLCDA MIIMDEVQAL 421 PCKLWQTLEK VFQALASEGN SRLLLMSATL PPFMKEALPL LPDYQGYFTL FNRYTLQLRL 481 QESQTLDNFC EEMSDRLIGW LECSNRILIT LNTRHSARRV RDFLSQSWPA EYGDVPLFFI 541 SADVTPKDRL EIVKQIKQGK PCVVVSTQCI EAGVDIDMDR VIRDFGPLDS IIQIAGRCNR 601 EGLRAQGVVE VVDLINEQDK RYSEMIYDTT HLQITRKILA DKQEIQEKEI ITLSTQYFKD 661 LTEQKDTGYN HLIRFAKWQE DTPVKELLRG KERLQIDFLV LEQDAELRDE MQIVGRIKDR 721 WERREAWRKL SGRIALVSVS IFAQPGFHPE QIADEFMGSW WVVREGYYNS KQGLLIEGET 781 MIL //