LOCUS ABO48947.1 695 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 putative PAS/PAC sensor protein protein. ACCESSION CP000612-395 PROTEIN_ID ABO48947.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_0399" /note="KEGG: swo:Swol_1487 sigma-L-dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein; sigma-54 factor, interaction domain-containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase" /transl_table=11 /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000644" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" BEGIN 1 MKVREINTLH SIALSPEQTV QEVVGIFLKH QVDGAPVIDA EGKIMGLFTK DQIYRLVNEG 61 LNVNTSVAEL MIPADKIGHL DDELEDLLNE DFEWLPIVDE DRVTSMITRS NLSKVFFDFY 121 RAISCELETI INSTINLIVS VDKEGKINVF NKAAEKFLGK EAQEVKGKNI AEIFPNSGLA 181 EVVRTGNVEL LQKVKLNDND YISNRSPIIK DNKVIGAVAV LQCISEMEKV SRELESVKEL 241 NEELQAIIES SFDGLYITDG KGLTLRLNKA YERITGLKAQ EFLGRYAEDI MKEGVVSESV 301 AVLALKRRET VSIIQEYRAG KTTLATGNPV FDKNGNIFRV VCNVRDITEL NQLNKELEQA 361 RGLSQHYQSQ LRTMSYFGSD RIVIKSEKMK DLLGLIIRLA GVDSTILITG ESGTGKELIA 421 ETLYINSNRR DGPFIKLNCG AIPENLLESE LFGYESGAFT GASKEGKAGY FELANGGTLF 481 LDEIGELPLN LQVKLLRVLQ SREIVRVGGK KPLKINIRIL AATNRNLKDM VDKKEFREDL 541 YYRLNVVPVN VPPLRERKEE ITSFVTHFML IFNRKYKVNK RITPEVVDLF LRYDWPGNIR 601 ELENLIERLI VITTGNLLTI NDLPANIKGN NPDNLASVQV SCLMPLKDAV ESVEKQVLER 661 AYAEFRTIRQ MAETLKVSAA TVVRKAAKYG ITQEL //