LOCUS       ABO48931.1               746 aa    PRT              BCT 28-JAN-2014
DEFINITION  Desulforamulus reducens MI-1 diguanylate cyclase with
            PAS/PAC sensor protein.
ACCESSION   CP000612-379
PROTEIN_ID  ABO48931.1
SOURCE      Desulforamulus reducens MI-1
  ORGANISM  Desulforamulus reducens MI-1
            Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae;
            Desulforamulus.
REFERENCE   1  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Complete sequence of Desulfotomaculum reducens MI-1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4000266
            Source DNA and bacteria available from Bradley M. Tebo
            (tebo@ebs.ogi.edu)
            Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu)
                 Paul Richardson (microbes@cuba.jgi-psf.org)
            Quality assurance done by JGI-Stanford
            Annotation done by JGI-ORNL and JGI-PGF
            Finishing done by JGI-LANL
            Finished microbial genomes have been curated to close all gaps with
            greater than 98% coverage of at least two independent clones. Each
            base pair has a minimum q (quality) value of 30 and the total error
            rate is less than one per 50000.
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES             Qualifiers
     source          /organism="Desulforamulus reducens MI-1"
                     /mol_type="genomic DNA"
                     /strain="MI-1"
                     /type_material="type strain of Desulfotomaculum reducens"
                     /db_xref="taxon:349161"
     protein         /locus_tag="Dred_0383"
                     /note="KEGG: swo:Swol_0011 putative PAS/PAC sensor
                     protein; TIGRFAM: PAS sensor protein; diguanylate cyclase;
                     PFAM: GGDEF domain containing protein; metal-dependent
                     phosphohydrolase, HD sub domain; PAS fold-3 domain
                     protein; PAS fold-4 domain protein; PAS fold domain
                     protein; SMART: PAS domain containing protein; PAC
                     repeat-containing protein; metal-dependent
                     phosphohydrolase, HD region"
                     /transl_table=11
                     /db_xref="InterPro:IPR000014"
                     /db_xref="InterPro:IPR000160"
                     /db_xref="InterPro:IPR000700"
                     /db_xref="InterPro:IPR001610"
                     /db_xref="InterPro:IPR003607"
                     /db_xref="InterPro:IPR006674"
                     /db_xref="InterPro:IPR013655"
                     /db_xref="InterPro:IPR013656"
                     /db_xref="InterPro:IPR013767"
BEGIN
        1 MEYYQKTPPR KIPIQTKDSL LKIISELEQR LQQITNNMLD LYTETDLAGI IRYVGPSHKT
       61 ILGYDPKALK GTSVFSRIHP KDISKVTDAF QTALNSASEI IVEYQLQHAT GHYLWVESVG
      121 RCLVEGDRRT GVVISTRNIT KRKEFENALR ESEFRFRQIT ENMRDIIIQI DKCGTLTYVG
      181 PSVKFLLGYQ PERLLGKKVF ELLHSEDYDK TTKLFANSLA NYTEGEFECR CRHADGRYLW
      241 LECAGKILSN SHGQATGAII TARDITDRKM TKQALLASEE RISRITENML DIMVELNSEG
      301 ITQYVSPSVK TVLGFDPKDL LGVPVFKNVH PEDLDRVLEA YEKSINHWSC MRVDFRYKNA
      361 QGYYRWLELI GNILQDEHGS VSTSILCLRD ITERKWAELQ TKYFSMHDPV TGLYNRTHFE
      421 LEMRRLENSS EPVGLIVADL DGLKLINDTM GHEVGDNALR AVANILKISY REEDIVARIG
      481 GDELAVILTN VSMDTLKVAV SRLEKNIKDY NMENPGSHLS LSIGYALREP PTKPLNEVFK
      541 EADYYMYRAK LHHAKSTRSS LVQTLMKALE ARDFITEGHG DRMKSLVVNI GKALGLPENK
      601 IYDLQLFAHF HDIGKVGISD KILFKPTKLT PDEHNEIKRH CEIGYRIAQA SPELLPIADW
      661 ILKHHEWWNG QGYPLGLKGE QIPLECRILA IADAYDAMTS DRPYRKAISH QEAIRELERN
      721 AGIQFDLFLL PMAVKVIEQS LAFSVD
//