LOCUS ABO48931.1 746 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 diguanylate cyclase with PAS/PAC sensor protein. ACCESSION CP000612-379 PROTEIN_ID ABO48931.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_0383" /note="KEGG: swo:Swol_0011 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase, HD sub domain; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase, HD region" /transl_table=11 /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR001610" /db_xref="InterPro:IPR003607" /db_xref="InterPro:IPR006674" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" BEGIN 1 MEYYQKTPPR KIPIQTKDSL LKIISELEQR LQQITNNMLD LYTETDLAGI IRYVGPSHKT 61 ILGYDPKALK GTSVFSRIHP KDISKVTDAF QTALNSASEI IVEYQLQHAT GHYLWVESVG 121 RCLVEGDRRT GVVISTRNIT KRKEFENALR ESEFRFRQIT ENMRDIIIQI DKCGTLTYVG 181 PSVKFLLGYQ PERLLGKKVF ELLHSEDYDK TTKLFANSLA NYTEGEFECR CRHADGRYLW 241 LECAGKILSN SHGQATGAII TARDITDRKM TKQALLASEE RISRITENML DIMVELNSEG 301 ITQYVSPSVK TVLGFDPKDL LGVPVFKNVH PEDLDRVLEA YEKSINHWSC MRVDFRYKNA 361 QGYYRWLELI GNILQDEHGS VSTSILCLRD ITERKWAELQ TKYFSMHDPV TGLYNRTHFE 421 LEMRRLENSS EPVGLIVADL DGLKLINDTM GHEVGDNALR AVANILKISY REEDIVARIG 481 GDELAVILTN VSMDTLKVAV SRLEKNIKDY NMENPGSHLS LSIGYALREP PTKPLNEVFK 541 EADYYMYRAK LHHAKSTRSS LVQTLMKALE ARDFITEGHG DRMKSLVVNI GKALGLPENK 601 IYDLQLFAHF HDIGKVGISD KILFKPTKLT PDEHNEIKRH CEIGYRIAQA SPELLPIADW 661 ILKHHEWWNG QGYPLGLKGE QIPLECRILA IADAYDAMTS DRPYRKAISH QEAIRELERN 721 AGIQFDLFLL PMAVKVIEQS LAFSVD //