LOCUS ABO48807.1 593 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 sigma54 specific transcriptional regulator, Fis family protein. ACCESSION CP000612-255 PROTEIN_ID ABO48807.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_0258" /note="PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: dsy:DSY1810 hypothetical protein" /transl_table=11 /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR002197" /db_xref="InterPro:IPR003593" BEGIN 1 MAGILLEIQE TVEKYASIMA KISNFDVEVV DADLFRVAGT GIFAPFVNMD MSAEGYAYRQ 61 VLKTGKLQII YTPGRDPICQ DCPKRHNCTE EIEIAMPILA RGKTIGVIGL VGSSEWHRNT 121 ILQDEGTYLG LIEQIANFIA AKATERIDQK KQESMLSALS CTIDHMEQGI LILGSDRTIT 181 LANYEARKQL KLEILEGSQV KLTPTRDKIN GQSEYLLSVA EKKTYILGEI YIPFKVDESY 241 AEVLVFTRSK NLHQKMYALT AAISTGNIIG SSEETAALRM EIEKVANSAS TVLITGESGT 301 GKEVAATAIW RAGNRRDQQF VALNCAAIPE SLLESELFGY VKGAFTGADP NGRIGKFELA 361 NHGIVFLDEI GDMPLYLQAK LLRILQDRKI VRIGSNQLIP VDVRVIAATN KDLKSMIADG 421 KFREDLYYRL NVIPLNILPL RQRQKDIPDL ANLFAQRYAT RFGKSQCRIP PQTMDALLAH 481 PWYGNVRELE NTIEFMVNMS DEEGILDLDT LPRDFLEHQR RAAYKHDWSA NPAEGSLPPT 541 DAQTVLPLKE VERREIQKAL QLFGESTQGK KSAAKSLGIS LATLYRKTEE FSK //