LOCUS       ABO48757.1              1185 aa    PRT              BCT 28-JAN-2014
DEFINITION  Desulforamulus reducens MI-1 DNA-directed RNA polymerase
            subunit beta' protein.
ACCESSION   CP000612-205
PROTEIN_ID  ABO48757.1
SOURCE      Desulforamulus reducens MI-1
  ORGANISM  Desulforamulus reducens MI-1
            Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae;
            Desulforamulus.
REFERENCE   1  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Complete sequence of Desulfotomaculum reducens MI-1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4000266
            Source DNA and bacteria available from Bradley M. Tebo
            (tebo@ebs.ogi.edu)
            Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu)
                 Paul Richardson (microbes@cuba.jgi-psf.org)
            Quality assurance done by JGI-Stanford
            Annotation done by JGI-ORNL and JGI-PGF
            Finishing done by JGI-LANL
            Finished microbial genomes have been curated to close all gaps with
            greater than 98% coverage of at least two independent clones. Each
            base pair has a minimum q (quality) value of 30 and the total error
            rate is less than one per 50000.
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES             Qualifiers
     source          /organism="Desulforamulus reducens MI-1"
                     /mol_type="genomic DNA"
                     /strain="MI-1"
                     /type_material="type strain of Desulfotomaculum reducens"
                     /db_xref="taxon:349161"
     protein         /locus_tag="Dred_0208"
                     /EC_number="2.7.7.6"
                     /note="KEGG: dsy:DSY0464 hypothetical protein; TIGRFAM:
                     DNA-directed RNA polymerase, beta' subunit; PFAM: RNA
                     polymerase, alpha subunit; RNA polymerase Rpb1, domain 3;
                     RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain
                     5; RNA polymerase Rpb1, domain 4; SMART: RNA polymerase I
                     subunit A domain protein"
                     /transl_table=11
                     /db_xref="InterPro:IPR000722"
                     /db_xref="InterPro:IPR006592"
                     /db_xref="InterPro:IPR007066"
                     /db_xref="InterPro:IPR007080"
                     /db_xref="InterPro:IPR007081"
                     /db_xref="InterPro:IPR007083"
                     /db_xref="InterPro:IPR012754"
BEGIN
        1 MLELNNFDSI RIGLASPDKI RQWSSGEVKK PETINYRTLK PERDGLFCER IFGPTRDWEC
       61 HCGKYKRVRY KGVVCDRCGV EVTRSKVRRE RLGHIELAAP VSHIWYFKGI PSRMGLLLDM
      121 SPRALEKVLY FVSYIVIEPG DTPLLKKQLL TETEYREYRD KFGNNFKAGM GAEAIKVLLV
      181 EINLEELARE LRQELKEVSG QRKIRAIRRL EVVEAFKKSG NRPEWMIMDV VPVIPPELRP
      241 MVQLDGGRFA TSDLNDLYRR VINRNNRLKR LLDLGAPDII VRNEKRMLQE AVDALIDNGR
      301 RGRPVTGPGN RPLKSLSDML KGKQGRFRQN LLGKRVDYSG RSVIVVGPRL KMHQCGLPKE
      361 MALELFKPFV MKKLVNDGHA HNIKSAKRMV ERVRPEVWDV LEDVIKEHPV MLNRAPTLHR
      421 LGIQAFEPVL VEGRAIKIHP MVCTAYNADF DGDQMAVHVP LSAEAQAEAR LLMLAANNIL
      481 NPKDGKPVAS PTQDMVLGSY YLTMDRDGDL GEGLIFKDEQ EAMLAYDNKQ VSLQAKITVR
      541 RKNGERLQTT VGRIIFNEVI PEELGYINKV CDKKTLSKIV ADCYRRLGNA HTAELLDGIK
      601 ELGYKYSTRA GITIGVPDIT IPEAKKEILA KAEEQVNKIE TQFRRGLITE DERYRKVIGI
      661 WNDATDKVTK ALMATLDKFN NVYMMATSGA RGNIQQIRQL AGMRGLMADP SGRIIDLPIK
      721 ANFREGLTVL EYFISTHGAR KGLADTALRT ADSGYLTRRL VDVAQDVIVR EDDCGTTEGI
      781 EVREIRDGTE GIEKLHERLE GRVPMEVVVH PETGEVLISQ EQVDNHQVMT EEQAQAIEDA
      841 GIEKVKIRSV ITCKTRYGVC KHCYGKNLAT GGNIDIGEAV GIIAAQSIGE PGTQLTMRTF
      901 HTGGVAGDDI TQGLPRVEEL FEARRPKGQA IVAEEDGSIA IREVKGRREI EITKDNGEKN
      961 VYAVPFGARI KVKEGQRIEA GDELTEGSVN PHDLLKIKGP AGVQVYLLQE VQRVYRLQGV
     1021 EINDKHIEVM IRQMLRKVKI EEAGDTELLP GGLIDIFEFE EENRKAVEQG GEPAVAKPVL
     1081 LGITKASLAT DSFLSAASFQ ETTRVLTEAA IKGKMDPLLG LKENVIIGKL VPAGTGMSRY
     1141 RNIEVLEEGQ PFLEEDRDIL LPERDRDYNF LSDEEKIDFD LTLEK
//