LOCUS       ABO48756.1              1145 aa    PRT              BCT 28-JAN-2014
DEFINITION  Desulforamulus reducens MI-1 DNA-directed RNA polymerase
            subunit beta protein.
ACCESSION   CP000612-204
PROTEIN_ID  ABO48756.1
SOURCE      Desulforamulus reducens MI-1
  ORGANISM  Desulforamulus reducens MI-1
            Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae;
            Desulforamulus.
REFERENCE   1  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Complete sequence of Desulfotomaculum reducens MI-1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3608104)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
            Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     URL -- http://www.jgi.doe.gov
            JGI Project ID: 4000266
            Source DNA and bacteria available from Bradley M. Tebo
            (tebo@ebs.ogi.edu)
            Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu)
                 Paul Richardson (microbes@cuba.jgi-psf.org)
            Quality assurance done by JGI-Stanford
            Annotation done by JGI-ORNL and JGI-PGF
            Finishing done by JGI-LANL
            Finished microbial genomes have been curated to close all gaps with
            greater than 98% coverage of at least two independent clones. Each
            base pair has a minimum q (quality) value of 30 and the total error
            rate is less than one per 50000.
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES             Qualifiers
     source          /organism="Desulforamulus reducens MI-1"
                     /mol_type="genomic DNA"
                     /strain="MI-1"
                     /type_material="type strain of Desulfotomaculum reducens"
                     /db_xref="taxon:349161"
     protein         /locus_tag="Dred_0207"
                     /EC_number="2.7.7.6"
                     /note="KEGG: chy:CHY_2318 DNA-directed RNA polymerase,
                     beta subunit; TIGRFAM: DNA-directed RNA polymerase, beta
                     subunit; PFAM: RNA polymerase Rpb2, domain 6; RNA
                     polymerase Rpb2, domain 7; RNA polymerase Rpb2, domain 2;
                     RNA polymerase beta subunit; RNA polymerase Rpb2, domain
                     3"
                     /transl_table=11
                     /db_xref="InterPro:IPR007120"
                     /db_xref="InterPro:IPR007121"
                     /db_xref="InterPro:IPR007641"
                     /db_xref="InterPro:IPR007642"
                     /db_xref="InterPro:IPR007644"
                     /db_xref="InterPro:IPR007645"
                     /db_xref="InterPro:IPR010243"
BEGIN
        1 MAYPEKVGNR VRWNYGKLRE VLDLPNLIEV QRNSYEWFLQ EGLREVFHDI SPIQDFTGNL
       61 ILEFLDYTLG EPKYSVEECK ERDVTYAAPL RVKVRLINKE TGEVKEQEVF MGDFPLMTSK
      121 GTFIINGAER VIVSQLVRSP GVYFADQIDP SGKRLFATTM IPNRGAWLEF ETDVNDHIFV
      181 RIDRTRKIPA TVLIRALGYG SNALIMELFE NDKFVQETLT RDNTDTEEEA LVEIYKRLRP
      241 GEPPTVESAR SLLNTLFFDP KRYDLAHVGR YKLQKKLKHG ILYRYPNGEE GPKEWDRLLN
      301 KEVPVDREFI RELTKEDIIA TFRYLLNLMQ GEGIVDDIDH LGNRRLRSVG ELLQNQFRIG
      361 LSRMERVVRE RMTIQDVDVI TPQVLINIRP VVASIKEFFG SSQLSQFMDQ TNPLAELTHK
      421 RRLSALGPGG LSRERAGFEV RDVHHSHYGR MCPIETPEGP NIGLIGSLST YARINSFGFM
      481 EAPYRKVDKE NKRVTDEIVY LTADEEEDHI IAQANAPLDE NGYFVEERVN ARRGHDTLLV
      541 PTDRVEYMDV SPKQVFSVAT SLIPFLEHDD ANRALMGANM QRQAVPLLRC QAPVVGTGIE
      601 HRAAKDSGVC IVAERGGEVV RVTATEVAVR TDEGRTDTYK LLKFTRSNQG TCINQKPIVN
      661 KGDRVEEGQI LADGPATEQG ELALGRNILV AFMTWEGNNY EDAILISEKA VKEDFFTSIH
      721 IEEYECDARD TKLGPEEITR DIPNVGEDIL KDLDERGIIR VGAEVRPGDI LVGKVTPKGE
      781 TELTAEERLL RAIFGEKARE VRDTSLRVPH GEAGKIVDVK VFSRENGDEL PPGVNHLVRC
      841 YIAQKRKISE GDKMAGRHGN KGVVARILPE EDMPFMADGT PVQIVLNPLG VPSRMNIGQV
      901 LETHLGWAAK TLGFNVATPV FNGASEESIW ETLRRAELPE DGKTVLYDGR TGEPFDNRVT
      961 VGYIYMIKLH HLVDDKIHAR STGPYSLVTQ QPLGGKAQFG GQRFGEMEVW ALEAYGAAYT
     1021 LQEILTVKSD DVVGRVKTYE AIVKGENVPE PGVPESFKVL IKELQSLGLD VKVLAEDEKE
     1081 IEIKEIEEDI TETAKELGIE LPEERRVSSS KEEIEEEEEV EDNSDEFDET FLEEAEDDFS
     1141 LDDED
//