LOCUS ABO48558.1 638 aa PRT BCT 28-JAN-2014 DEFINITION Desulforamulus reducens MI-1 DNA gyrase subunit B protein. ACCESSION CP000612-6 PROTEIN_ID ABO48558.1 SOURCE Desulforamulus reducens MI-1 ORGANISM Desulforamulus reducens MI-1 Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulforamulus. REFERENCE 1 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Desulfotomaculum reducens MI-1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3608104) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000266 Source DNA and bacteria available from Bradley M. Tebo (tebo@ebs.ogi.edu) Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Desulforamulus reducens MI-1" /mol_type="genomic DNA" /strain="MI-1" /type_material="type strain of Desulfotomaculum reducens" /db_xref="taxon:349161" protein /locus_tag="Dred_0006" /EC_number="5.99.1.3" /note="KEGG: chy:CHY_2705 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II" /transl_table=11 /db_xref="InterPro:IPR000565" /db_xref="InterPro:IPR001241" /db_xref="InterPro:IPR002288" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR006171" /db_xref="InterPro:IPR011557" /db_xref="InterPro:IPR011558" /db_xref="InterPro:IPR013506" BEGIN 1 MDQQQQNNKY SADQIQVLEG LEAVRRRPGM YIGSTSARGL HHLVYEVVDN SIDEALAGYC 61 DKIIVTIQED NSITVEDNGR GIPVDLHPKV GRPAVEVVLT MLHAGGKFGG GGYKVSGGLH 121 GVGVSVVNAL SKYLSVEIKR NGKIYKQEYS RGIPTTELQI VGNSKTTGTK VTFKPDEEIF 181 EELVFSLETL SQRIRELAYL NKGIKIILQD KRKDPVAEQI FQYDGGIKDF VKHLNRNKQT 241 IHTKPIYVSG EKEQIVVEVA IQYNDGYTEN MLSYANNIHT VDGGTHEVGL KTALTRVIND 301 YGRQHGVLKN NDANLSGEDI REGATIVISV KVPEPQFEGQ TKTKLGNSEV RGIVDSIFAE 361 KLSTYLVENP SVAKKIIEKG ITAARAREAA RKARELTRRK SALETMSLPG KLADCSEKDP 421 SVSEIYLVEG DSAGGSAKQG RERRFQAILP LKGKILNVEK ARMDKILANE EIRAMITAMG 481 TGIGEDFDIA KARYHKIVIM TDADVDGAHI RTLLMTFFYR YMRQLIEAGY VFVAQPPLYR 541 VRKGKHDSYC YSDNELEELL NRIGHDRVNI QRYKGLGEMN PEQLWETTMD PDTRTMLQVT 601 LEDAIEADAT FSMLMGDRVE PRRDFIQENA KYVRNLDI //