LOCUS ABF10403.1 1993 aa PRT BCT 28-JAN-2014
DEFINITION Cupriavidus metallidurans CH34 large extracellular alpha-
helicalprotein protein.
ACCESSION CP000352-3719
PROTEIN_ID ABF10403.1
SOURCE Cupriavidus metallidurans CH34
ORGANISM Cupriavidus metallidurans CH34
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Burkholderiaceae; Cupriavidus.
REFERENCE 1 (bases 1 to 3928089)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Martinez,M.,
Goltsman,E., Pitluck,S., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E., Mergeay,M., Benotmane,M.A.,
Vallaeys,T., Michaux,A., Monchy,S., Dunn,J., McCorkle,S.,
Taghavi,S., van der Lelie,D. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of the chromosome of Ralstonia metallidurans CH34
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3928089)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Martinez,M.,
Goltsman,E., Pitluck,S., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E., Mergeay,M., Benotmane,M.A.,
Vallaeys,T., Michaux,A., Monchy,S., Dunn,J., McCorkle,S.,
Taghavi,S., van der Lelie,D. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (18-APR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
REFERENCE 3 (bases 1 to 3928089)
AUTHORS Janssen,P.J., Van Houdt,R., Moors,H., Monsieurs,P., Morin,N.,
Benotmane,R., Lapidus,A., McCorkle,S., Monchy,S., Taghavi,S., van
der Lelie,N., Dunn,J., Leys,N. and Mergeay,M.
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2010) Instute of Environment, Health and Safety,
SCK-CEN, Boeretang 200, Mol 2400, Belgium
REMARK Sequence update by submitter
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 2351356
Source DNA and bacteria available from John J. Dunn (jdunn@bnl.gov)
Contacts: John J. Dunn (jdunn@bnl.gov)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-PGF
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Cupriavidus metallidurans CH34"
/mol_type="genomic DNA"
/strain="CH34"
/type_material="type strain of Cupriavidus metallidurans"
/db_xref="taxon:266264"
protein /locus_tag="Rmet_3531"
/transl_table=11
BEGIN
1 MMSKIVTAVG TAAAGLVLGA VLWAPMASAA QITRFSPEGV VPQVRQVAIR FDEAMVPMGD
61 LKAAPPAAVS CTGGSVGGSG RWVNATNWVY DFERDLPPGV RCSVRMSAGL KSVAGKTYAG
121 KPEYRFETGG PFVISARPSG GQIEEDQVFV LRFNGAATAG SIREHAWCQA EGLGERIPVR
181 LLTGKERDGV IEAVRWNDIV KQNPEAVHLL ACQQRLPAGA RMQLVLDAGI STPSGLATTA
241 PRRFDYQVRE PFAAGFTCER ERAEAPCTPL RPLVVTFTAP VPRKLAEHIV LKTPSGPRAP
301 KFDSDDARDA PVSSVTFPGP FPEKASLTIE APKDLKDESG RSLSNADLFP IKLTTAALPP
361 LAKFAAAPFG VVERFADVPR GKSPADYPPL LPVTLRNVEA DLPALSARAE AGTVARLKVD
421 DDGAILRWFG MVKRMHENSW TRQELDAIRA GKSPSEARSP RNAPSIETRS VSLLEGVSGA
481 KTLAIPKSND TSPRPFEVVG IPLPEPGFHV VEIASPMLGE ALLGRKAPMY VRTAVLVTNL
541 GVHFKLARGL ADGDMSGLAW VTSLDDGKPV ANAKVAVRSC DGELLGEGAT DATGVVRFAK
601 LPDRRYKDCA NGMDGYFVSA RIAADHPQAR GKADMAFVMS DWNRGIETWR FNVPTDLSPN
661 QTVRAHTIFD RTLLRVGETV SMKHLIRTET AQGFALPAAM PDKMVITHEG SGQTYELPLA
721 WRNTATGGRS AENAFQVPQA AKLGVYDVAL VYGDGRTLSS GSFRVEAFRL PVLAGTLSVT
781 KDPKAKGNAL VAPAEVPVGV EIHYTNGGGA AGLPVSVSAL MRNKYVNFAD YDDFSFNAPR
841 PQQQQSASGD EEEDQEGESS RDEAEKLVAD KLPLTLDKDG NGKVTIKKLP KVNVPGDLVL
901 EAGFADPNGE IQTLRQTVPL WPSAVVAGIR AANWVSVSQK LAVYGVVLDT QGKPIADTPV
961 QVKASARITT SARKRVVGGF YRYDNRSETK DLGVVCETRT DAQGRARCEV ALSQAGEVEL
1021 VANARDGDGR VTQAATTVWV TRQGELWFGG ENHDRMDVLP EKKAYAPGDT AVFQVRMPFR
1081 RATALVAIER EGILDTEVVE LNGTDPTIKL KVKPEWGPNV YVSVLSIRGR LREVPWYSFF
1141 TWGWRQPLDW WHAFRSEGKE YVAPSPLVDL SKPAFRLGLA EIRVGNEAHR LDVTVTPDKA
1201 TYPVRGKAHV VVQVKLPDGK PAANGEVALA AVDQSLLELM PNTSWNLLDA MLQRRSYGVE
1261 TSTAQMEIIG RRHYGRKAVA AGGGGGKSPT RELFDTLLLW NPRVQLDAEG KAALDVPLND
1321 SLTSFRIVAV ADLGAGRFGS GSASIAATQD LQMIAGLPLL VREDDKYRAM FTLRNTTQRA
1381 MTVEATARAT LVDAQTLPAQ TVQIPAGEAR EIGWDITAPA LLAFSRGGSI LWEVGATEKG
1441 TGTASDKLKV SQQIVPAIPV TVQQAVLAQL TPNASMPVQA PAGALADPKG QVRGGMQVSL
1501 QSSLAGGMPG VREWFRNYPF TCLEQRSSKA LGLGDAAAWD ALMVQLPSYL DSNGLAAYFP
1561 LRSDGSYGSE VLTAYLLSIS DEAARAGLPM RVPDALRDQM ERGLTAFVEG RITPPRWAPS
1621 SATMDLDVRK LAALDALSRT GHAQARMLGS IQILPEQWPT SALIDWLGIL SRVQDIPQRD
1681 KRMAEATQLL RSRLTVQGTR LVFSTERTDN WWWLMSGGDV NAAKLLALAT QLPDWKGDVP
1741 ELVTGLLGRQ TRGAWMTTTA NAWGVLAIQR YAQVYEKTPV AGAARVALGD ASRTFEWSKA
1801 TQKDGVASGM VELPWPAKTS TAPATLQVEQ QGSGRPWATV RALAAVPPTE PVSAGYRVRR
1861 TVTPVDQAVA GKWSRGDTYR VKLDIDAQAD MTWVVVSDPV PTGATILGSG LGRDSEIATR
1921 DEKKSWSAFT ERTPAVYREY FGYVPKGALS VEYTVRLNNA GEFTLPPTRV EALYAPDVFG
1981 ETPNAKMTVG AKP
//