LOCUS ABF07272.1 808 aa PRT BCT 28-JAN-2014
DEFINITION Cupriavidus metallidurans CH34 Putative 3-hydroxyacyl-
coa dehydrogenase oxidoreductase protein protein.
ACCESSION CP000352-396
PROTEIN_ID ABF07272.1
SOURCE Cupriavidus metallidurans CH34
ORGANISM Cupriavidus metallidurans CH34
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Burkholderiaceae; Cupriavidus.
REFERENCE 1 (bases 1 to 3928089)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Martinez,M.,
Goltsman,E., Pitluck,S., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E., Mergeay,M., Benotmane,M.A.,
Vallaeys,T., Michaux,A., Monchy,S., Dunn,J., McCorkle,S.,
Taghavi,S., van der Lelie,D. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of the chromosome of Ralstonia metallidurans CH34
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3928089)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Martinez,M.,
Goltsman,E., Pitluck,S., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E., Mergeay,M., Benotmane,M.A.,
Vallaeys,T., Michaux,A., Monchy,S., Dunn,J., McCorkle,S.,
Taghavi,S., van der Lelie,D. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (18-APR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
REFERENCE 3 (bases 1 to 3928089)
AUTHORS Janssen,P.J., Van Houdt,R., Moors,H., Monsieurs,P., Morin,N.,
Benotmane,R., Lapidus,A., McCorkle,S., Monchy,S., Taghavi,S., van
der Lelie,N., Dunn,J., Leys,N. and Mergeay,M.
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2010) Instute of Environment, Health and Safety,
SCK-CEN, Boeretang 200, Mol 2400, Belgium
REMARK Sequence update by submitter
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 2351356
Source DNA and bacteria available from John J. Dunn (jdunn@bnl.gov)
Contacts: John J. Dunn (jdunn@bnl.gov)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-PGF
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Cupriavidus metallidurans CH34"
/mol_type="genomic DNA"
/strain="CH34"
/type_material="type strain of Cupriavidus metallidurans"
/db_xref="taxon:266264"
protein /locus_tag="Rmet_0386"
/EC_number="4.2.1.17"
/transl_table=11
BEGIN
1 MSNFIVKKVA VLGAGVMGAQ IAAHLINARV PVILFDLPAK EGPKNGIADR AIENLKKLSP
61 APLGIKEEAG LIRAANYEDD IALLKECDVV IEAIAERMDW KHDLYKKVSP HLAPNAIFAT
121 NTSGLSITAL SDGFDADLKS RFCGVHFFNP PRYMHLVELI PTATTKPEIL DRLESFLTTS
181 LGKGVVRAKD TSNFIANRVG IFSILAVFAE AEKFGIPFDI VDDLTGTKLG RAKSATFRTA
241 DVVGLDTMAH VIKTMQDNLT DDPFAPVYKT PAVLKGLVDA GALGQKTGAG FYKKEGKAIK
301 VLDAKSGQYV ESGKKADEIV VRILKKEPAE RIKLLRESTN PQAQFLWGVF RDVFHYIAVY
361 LEQIAGSAAD IDLAIRWGFG WNSGPFEDWQ AAGWKQVAEW VKEDVEAGKA LSNAPLPAWV
421 LNGAVAENGG VHGAQGSWSP AASAFVKRAE LPVYQRQVFR AALKGTDSPD PRRAGKTIEE
481 NDGARIWTTD GADDVLVISF KSKMNTVGPD VLDTIVRAVE LAEASYKGLV VWQPTSLQLG
541 APGGPFSAGA NLEAAMPAFM MGGAKGIEPF VKKFQDTMMR VKYAAVPVVP AVSGIALGGG
601 CELMLHSAKR VVALESYVGL VEVGVGLVPA GGGLKEAAIA AAKAAQAAGS TNYLNFITNR
661 FQAAAMAKVS SSALDAQKIG YVQPTDTIVY NVHELLYVAQ NEVRALANAG YRAPLPGQLI
721 PVAGRSGIAT IKASLVNMRD GNFISAHDFL IASRIAEVVC GGDVEAGSLV SEDWLLALER
781 RAFIDLLGNG KTQERIMGML QTGKPVRN
//