LOCUS ABF06940.1 793 aa PRT BCT 28-JAN-2014
DEFINITION Cupriavidus metallidurans CH34 transpeptidase involved
in peptidoglycan synthesis (penicillin-binding protein
2) protein.
ACCESSION CP000352-56
PROTEIN_ID ABF06940.1
SOURCE Cupriavidus metallidurans CH34
ORGANISM Cupriavidus metallidurans CH34
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Burkholderiaceae; Cupriavidus.
REFERENCE 1 (bases 1 to 3928089)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Martinez,M.,
Goltsman,E., Pitluck,S., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E., Mergeay,M., Benotmane,M.A.,
Vallaeys,T., Michaux,A., Monchy,S., Dunn,J., McCorkle,S.,
Taghavi,S., van der Lelie,D. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of the chromosome of Ralstonia metallidurans CH34
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3928089)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Martinez,M.,
Goltsman,E., Pitluck,S., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E., Mergeay,M., Benotmane,M.A.,
Vallaeys,T., Michaux,A., Monchy,S., Dunn,J., McCorkle,S.,
Taghavi,S., van der Lelie,D. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (18-APR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
REFERENCE 3 (bases 1 to 3928089)
AUTHORS Janssen,P.J., Van Houdt,R., Moors,H., Monsieurs,P., Morin,N.,
Benotmane,R., Lapidus,A., McCorkle,S., Monchy,S., Taghavi,S., van
der Lelie,N., Dunn,J., Leys,N. and Mergeay,M.
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2010) Instute of Environment, Health and Safety,
SCK-CEN, Boeretang 200, Mol 2400, Belgium
REMARK Sequence update by submitter
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 2351356
Source DNA and bacteria available from John J. Dunn (jdunn@bnl.gov)
Contacts: John J. Dunn (jdunn@bnl.gov)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-PGF
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Cupriavidus metallidurans CH34"
/mol_type="genomic DNA"
/strain="CH34"
/type_material="type strain of Cupriavidus metallidurans"
/db_xref="taxon:266264"
protein /gene="mrdA"
/locus_tag="Rmet_0054"
/transl_table=11
BEGIN
1 MTEIRNVELE IGRFRIRVAA AALFTVVCFG LLFSRFLWLQ WYKHDQYSAK AEDNRISVAP
61 IEPNRGIIMD RNGVVLARNY SAYTLEITPS KLTDTLDNTI EELATLVDIQ PRDRRRFKRL
121 LEESRSFESL PIRSQLTDEE VARFSAQRFR FPGVDVRARL FRQYPLGEAA SHVVGYLGRI
181 SQRDQERIEA MDEANDAADG DKYDPRKDAD NYKGSNYIGK IGLEQSYETE LHGLTGFEEV
241 EVSAGGRPIR TLSTSPATPG NNLILSLDIR LQQLAEQLFG DRRGALVAIE PETGDILAFV
301 SKPTFDPNLF VEGIDSKTWD ELNNSPDKPL LNRPLRGTYP PGSTYKPFMA LAALTTGKRT
361 AAWGMHDPGF FTLGNHTFRD DKPGGHGWVD MQASIVQSCD TYYYMLARDM GVNAIHDFMK
421 PLGFGQITGI DIEGENRGIL PSTDWKRKAY RRPEQQKWYD GETISLGIGQ GYNSFTILQL
481 ANAVSILVNN GVAMKPHLVK AVEDSVSRKR TLTVPKESYR IPLKQGDIDV IKRSMVAVTH
541 SGTAARVFAG AAYESAGKTG TAQTYTLGKN EKYNHHALDE RKRDHSLYTA FAPADHPKIA
601 LALIVENAGF GAAVAAPIAR KVMDYYLLGK WPEELAATAP PPAERERAGG KPPVDTPSVF
661 TTGQTANAAS ATVMQTAPAA ASDATTGAAN AAGASAAGAS ASVPAARSAS DTIAGQLDPD
721 AIAPASAEVT LDARMLQALG HSKPAPTPPA TPSRATPASA PAPAKPKTQP ARPKPANVAG
781 PASGSSARNN VSE
//