LOCUS ABE40792.1 868 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 conserved hypothetical
protein protein.
ACCESSION CP000283-3552
PROTEIN_ID ABE40792.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3569"
/transl_table=11
/db_xref="InterPro:IPR000731"
BEGIN
1 MLKSAVVSVV KASTRFASIT VLIGVILAIA SGFYTFKHFA INTDISHLIS SDLDWRKRDI
61 AFEKAFDQER LILAVVEAPT PEFANAAAAA LTEKLSSNSN NFDSVKRLGG GAFFDKHGLL
121 FLPTEELAKV TSQFQSAVPL IEIMAGDPSI RGLTGALETG LAGVKRGQVT LEGAAAPFNT
181 ISQTVEDVLA KRNAFFSWRG LTSPEPLTDG DKRAFIEIKP ILDFKELEPG RAATDAIRAA
241 AVDLKLEQQF GARVRLTGPV AIANEEFSTV KEGAIVNGIG TVVVVLFILW MALHSSKIIF
301 AVAANLFVGL AITTAVGLLL VDSLNLLSIA FAVLFVGLGV DFGIQYSVRY RSERFKTNDL
361 DKALVQAAEY SAVPLSLAAM STAAGFLSFL PTSYRGISEL GEIAGAGMVV AFLSSITVLP
421 ALIKLLNPAG EKEPLGYAFL APLDRFLEDH RIGIIAGTIG VALAGLPLLY FMHFDFNPIN
481 LRNPKVESIA TFLDLRRDPN TGANAVNVMA PSEQAAKEVE ARLSKLPEVS RTLSLDTFVP
541 GDQPAKLKLI QAGAKVLQPA LNPDQIDAPP TDQENAEALN GSAEALRKVA GEASGPGPDA
601 ARRLAVALSS LAGADQATRD KAQDVFVRPL KLAFDQLRSM LQAQQVTLAN LPEDIVSSWK
661 TKDGQLRVEA LPKGDPNDND TLRKFAAAVL QAEPNAIGGP VSILKSGDTI VASFIQAGLW
721 ALLSISLLLW ITLRRITDVL LTLVPLLVAG AVTLEICVLI GLPLNFANIV ALPLLLGVGV
781 AFKIYYVTAW RSGRTNLLQS ALTRAIFFSA LTTATAFGSL WLSSHPGTAS MGKLLALSLL
841 TTLAAVLLFQ PALMGKPRHI DETGDTDH
//