LOCUS ABE37914.1 958 aa PRT BCT 28-JAN-2014 DEFINITION Rhodopseudomonas palustris BisB5 NADH dehydrogenase (quinone) protein. ACCESSION CP000283-674 PROTEIN_ID ABE37914.1 SOURCE Rhodopseudomonas palustris BisB5 ORGANISM Rhodopseudomonas palustris BisB5 Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae; Rhodopseudomonas. REFERENCE 1 (bases 1 to 4892717) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A., Oda,Y., Harwood,C.S. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Rhodopseudomonas palustris BisB5 JOURNAL Unpublished REFERENCE 2 (bases 1 to 4892717) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A., Oda,Y., Harwood,C.S. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000372 Source DNA and bacteria available from Caroline S. Harwood (csh5@u.washington.edu) Contacts: Caroline S. Harwood (csh5@u.washington.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Rhodopseudomonas palustris BisB5" /mol_type="genomic DNA" /strain="BisB5" /db_xref="taxon:316057" protein /locus_tag="RPD_0676" /EC_number="1.6.99.5" /transl_table=11 /db_xref="InterPro:IPR001750" /db_xref="InterPro:IPR003916" /db_xref="InterPro:IPR003945" /db_xref="InterPro:IPR007182" BEGIN 1 MQLALIALIP LVGAVLPLVA IRSGRNACTL VTAGVSLSAL VILLANAPAV FDGATIRSGA 61 EWVPAIGLSF SFFLDGLGLF FATMILVIGL LVIIYSRFYL DRDDPMGRFF AFLLLFQGAM 121 LGIVISDNIL LLVVFWELTS LSSFLLIGYW HHLPEGRQGA RMALVVTGGG GLLLMAGMLL 181 LGQAAGSYEL TDILQRGDAI KASALYVPIL LLVLGAAFTK SAQFPFHFWL PHAMAAPTPV 241 SAYLHSATMV KAGVFLLARL WPVLSGTELW FGIVATTGLV TMLIGAWIAL FKDDLKGILA 301 HSTVSHLGLM TMLLGFGTRY AVIACMFHIL NHATFKAALF MSAGIVDHET GTRSLRRLGG 361 LLRPMPISAV LALIAAASMA GVPLLNGFLS KEMMLEAATE ASVLGSAWIV PAAATLGALL 421 SVAYSARFAF STYLGPRHAA LPKTPHDPPF GMWAPVAALV IPVIAIGLWP QLLAGAVVER 481 TAQAVVGAAT LPFQKLAIWH GLTWPLLMSG IALAGGLLLL TAHAPIERVR GWLPRPDAKA 541 MFDAVVAAAV HGARWTIHHL HNESLPRYLA VITTTVLAVG LVGFLGGRHD AGARALLPVN 601 LPAVVGWILL IAASLAVMMF HVHRLLTLIL SGVAGLIVSL AFMQFSAPDL ALTQISVEVV 661 TVILLLLALN LLPKLTPSEP RFGRRLRDGV IAGAGGLAAA ALAYAVMTRD FSSISAFHLA 721 ESKPGGGGTN VVNVILVDFR GFDTFGEIIV LCIAALVIYA LLSSALEGAA ARRLDAMRQR 781 TDSADAHPLV LVVAARVLLP LAITVGVYIF LRGHNQPGGG FIAGLVVATA IIMQFMASGY 841 AWSADQRRID GHRLLGAGVL IATATGIGAI LFGRPFLTSA FVYVPVPLIG EVELASAILF 901 DIGVFLAVVG TVVLALSQIS RVERRAKRTP APLGPSDIPL VPRAPMRPRL PPPSNQEG //