LOCUS ABE37559.1 923 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 DNA mismatch repair protein
MutS protein.
ACCESSION CP000283-319
PROTEIN_ID ABE37559.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_0321"
/transl_table=11
/db_xref="InterPro:IPR000432"
/db_xref="InterPro:IPR001638"
/db_xref="InterPro:IPR005748"
/db_xref="InterPro:IPR007695"
/db_xref="InterPro:IPR007696"
/db_xref="InterPro:IPR007860"
/db_xref="InterPro:IPR007861"
BEGIN
1 MHRVMTIRPD IPPQPDIAAP AEPPARVSPM MEQYHEIKAA NPGLLLFYRM GDFYELFFED
61 AEIASRALGI TLTKRGKHLG ADIPMCGVPV ERSDDYLHRL IALGHRVAVC EQTEDPAAAR
121 ARKSVVRRDV VRLITPGTLT EDTLLDARAN NYLMAIARTR GSAGVDRIGL AWIDISTGEF
181 CVTECATGEL SATLARINPN EAIVSDALYS DAELGPSLRE LAAVTPLTRD VFDSATAERR
241 LCDYFAVATM DGLAALSRLE AAAAAACVTY VDRTQLGKRP PLSPPAREAA GATMAIDPAT
301 RANLELTRTL GGERRGSLLD AIDCTVTAAG SRLLAQRLAA PLTDEAAIAR RLDAVAAFVA
361 DSALREQIRS ALRAAPDMAR ALARLSLGRG GPRDLASLRD GVSAADKVLA QLSQLAQPPH
421 DIAAAMAALR RPSRDLCQEL ARALADDLPL LKRDGGFVRD GYEAALDETR KLRDASRLVV
481 AAMQARYADE TGVKGLKIRH NNVLGYFVEV TAQHGDRLMA PPLNATFIHR QTLAGQVRFT
541 TAELGEIEAK IANAGDRALG LELDIFDRLA AMIDTAGDDL RAAAHAFALL DVATALAKLA
601 VSDNYVRPEV DGSLAFAIEG GRHPVVEQAL KRAGEPFIAN ACDLSPVPPP FPPPLAGEGR
661 VGAGQIWLLT GPNMAGKSTF LRQNALIALL AQTGSFVPAS RARIGIVDRL FSRVGAADDL
721 ARGRSTFMVE MVETATILNQ ATERALVILD EIGRGTATFD GLSIAWAAIE HLHEQNRCRA
781 LFATHYHELT ALSAKLPRLF NATVRVKEWR GEVVFLHEVL PGSADRSYGI QVAKLAGLPP
841 SVVARAKSVL AKLEANDRGQ SARTLADDLP LFAMTARAPV EPPPPSEAEQ LIEAVRALHP
901 DELSPREALD ALYALKAKLP KAD
//