LOCUS ABE37540.1 825 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 ATP-dependent helicase
HrpB protein.
ACCESSION CP000283-300
PROTEIN_ID ABE37540.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_0302"
/transl_table=11
/db_xref="InterPro:IPR001410"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR007502"
/db_xref="InterPro:IPR010225"
/db_xref="InterPro:IPR011545"
BEGIN
1 MHLSRSFDTP LPIDDALADL TSALAGNSTA VLVAPPGAGK TTRVPLALLD QPWLGTKKII
61 MLEPRRIAAR ASAERMAKTL GERAGETVGY RVRFGSKISR ATRIEVVTEG IFTRQILDDP
121 ELAGIGAVLF DEFHERSLDA DLGLALARDA QQGLREDLRI LVMSATIDGA RVARLLGDAP
181 VVESLGRAFP VETRYLGRRS DAPMERQMAE AIAAALRSDA GSVLAFLPGA AEIRRTETML
241 RERVHDAAIE IVPLFGALDA AVQDRAIQPA PKGSRKVVLA TSIAETSLTI EGVRIVVDCG
301 LSRVPRYEPD IGLTRLETVR ASRAAVDQRR GRAGRIEPGV CYRLWDEPQT ASLPAYTQPE
361 ILSADLTSLL LDLAQWGVTD PATLAFLDPP PGPALKEARE LLAELGALDA DGRITDEGRA
421 LRAMALPPRL ARMIVDAARL DHGEEAAEIA AILTERGLGG DSVDLDHRRD QFRRDRSQRA
481 MSARQMAQRW AGQASSPSPQ GGEELSTGVL LAFAFPDRVA KNRGNGSFVL ANGRGAAIEQ
541 TSALARAPYL AVAELTGTAA QGRILLAAPI TLAEIEQHFA GQITDADDVS FDRAAMALRA
601 RRRRALHAIT LSEAPQALTP SAETAQVLAD GLIAAGLDRL PWSKQLQQWR GRVMFLRKAE
661 GEPWPDLSDS ALAEQREDWL VPALFDKAGL KDVSAGDLSD ALMNLLPWDL RARLDREAPT
721 HFEAPTGSRL PIDYEAEQGP TIAVRLQELF GLTSHPSVAG GAVPLVLELL SPAHRPVQVT
781 RDLPGFWRGS YAAVRADLRG RYPRHPWPED PAGAPPTRRA KPKGT
//