LOCUS ABE37402.1 824 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 phenylalanyl-tRNA synthetase
beta subunit protein.
ACCESSION CP000283-162
PROTEIN_ID ABE37402.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_0162"
/EC_number="6.1.1.20"
/transl_table=11
/db_xref="InterPro:IPR000834"
/db_xref="InterPro:IPR002547"
/db_xref="InterPro:IPR004532"
/db_xref="InterPro:IPR005121"
/db_xref="InterPro:IPR005146"
/db_xref="InterPro:IPR005147"
BEGIN
1 MSQLQHSARR QHSARRKSQP MKLTLSWLKD HLDTDETLTA LADKLTMIGL EVEDITDKAK
61 ALAPFTIARV LSAEKHPNAD KLQVCSVDTG DGGAPVQVVC GAPNARAGLI TVFSPPGTFI
121 PGKNITLGVG NIRGVESRGM LCSAAELQIS EDHDGIMELP ADAPIGKAYA EWAGLGDPVL
181 DINLTPNRQD CAGVHGIARD LAAADMGKLK ESGIKPIKGE FPCPVQVSVE DDKLCPGFAL
241 RLVRGVKNGP SPEWLQKRLT AIGLRPINAL VDITNFLTFD RSRPLHVFDA AKVKGNLVVR
301 RARDGETLLA LDGRNYNLDP GVCVIADDHG VESLAGIMGG EASGCSAETT DVLIESALWN
361 EINIAQSGRK LGINTDARYR FERGVDPAFM VPGLDLATRL VIEFCGGTPS EMVVVGRTFG
421 DDRIIDFPLS EVKRLAGIDV PLAEARRILT HLGFMVAGQG AVVKVAAPSW RSDVHGKADI
481 VEEIVRIVGV DKVPMTPFER GDAPRKPVLT PIQTRTRRAK RALAARGLTE AVTWSFIAKP
541 SAEAFGGGQP ELALANPIAS DLSDMRPSLL PGLVAAAQAN ADRGTPDLAL FEVGQIFKGD
601 RPQDQFVAAS GVRRGVASSN GLGRHWSGSA PASALDAKAD AFAVLAAAGA PMAGLQIATG
661 KALPAWLHPG RSGAIQIGPQ NVLGYFGELH PRVLEQLHAD GPLVGFEVIL DNIPAAKQRP
721 TRAKPSLELS AFQPVSRDFA FIVDRKVQAA DIVRAAQSID KKLISSVVVF DVYEGKGVDP
781 DKKSVAIAVS LQPRDKTMTD QEIDAVGAKI VAEVTKKTGG VLRG
//