LOCUS       ABD99013.1              1221 aa    PRT              BCT 31-JAN-2014
DEFINITION  Ligilactobacillus salivarius UCC118 DNA-directed RNA polymerase
            beta' chain protein.
ACCESSION   CP000233-190
PROTEIN_ID  ABD99013.1
SOURCE      Ligilactobacillus salivarius UCC118
  ORGANISM  Ligilactobacillus salivarius UCC118
            Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
            Ligilactobacillus.
REFERENCE   1  (bases 1 to 1827111)
  AUTHORS   Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P.,
            Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'Sullivan,G.C.,
            Collins,J.K., Higgins,D., Shanahan,F., Fitzgerald,G.F., van
            Sinderen,D. and O'Toole,P.W.
  TITLE     Multireplicon genome architecture of Lactobacillus salivarius
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 103 (17), 6718-6723 (2006)
   PUBMED   16617113
REFERENCE   2  (bases 1 to 1827111)
  AUTHORS   Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P.,
            Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'Sullivan,G.C.,
            Collins,J.K., Higgins,D.G., Shanahan,F., Fitzgerald,G.F., van
            Sinderen,D. and O'Toole,P.W.
  CONSRTM   Alimentary Pharmabiotic Centre, University College Cork
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2005) Department of Microbiology, Alimentary
            Pharmabiotic Centre, University College Cork, College Road, Cork,
            Ireland
FEATURES             Qualifiers
     source          /organism="Ligilactobacillus salivarius UCC118"
                     /mol_type="genomic DNA"
                     /strain="UCC118"
                     /db_xref="taxon:362948"
                     /focus
     source          /organism="Lactobacillus phage Sal2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364251"
     source          /organism="Lactobacillus phage Sal1"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364252"
     source          /organism="Lactobacillus phage Sal4"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364253"
     source          /organism="Lactobacillus phage Sal3"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364254"
     protein         /gene="rpoC"
                     /locus_tag="LSL_0198"
                     /EC_number="2.7.7.6"
                     /note="COG0086 [K] DNA-directed RNA polymerase, beta'
                     subunit/160 kD subunit"
                     /transl_table=11
BEGIN
        1 MIDVNKFDSM QIGLASSDKI RSWSYGEVKK PETINYRTLK PEKDGLFDER IFGPTKDWEC
       61 ACGKYKRIRY KGVVCDRCGV EVTRSKVRRE RMGHIELAAP VTHIWYFKGI PSRMGLVLDM
      121 SPRALEEIIY FASYVVTDAG DTALEKKQLL TEGEYREKRE EYGDGFKAAM GAEAIRTLLR
      181 DVDLEKECAE LKEELREATG QKRTRAVRRL DILEAFLNSG NRPDWMVMDA IPVIPPDLRP
      241 MVQLEGGRFA TSDLNDLYRR VINRNNRLKR LLDLNAPGII VQNEKRMLQE AVDALIDNGR
      301 RGRPVTGPGN RPLKSLSHML KGKQGRFRQN LLGKRVDYSG RSVIDVGPKL KLNQMGIPHE
      361 MALELFKPFM MRELVKREMA SNIKNAKRKI ERRDEDIWDV LDDVIKEHPV LLNRAPTLHR
      421 LGIQAFEPVL VNGKAMRLHP LACEAYNADF DGDQMAIHVP LSDEAQAEAR LLMLAAHHIL
      481 APKDGKPIIS PSQDMTIGNY YITLEEAGRE GEGMVFKDVN EVRTAYQNGY VHLHTRIGLQ
      541 ASSLAKLGTP FTDWQKERIL ITTAGKAIFN EILPADFPFL NEPTQENLTG MTPDKYFVEP
      601 GTDIKEFIKN QPLVGPFKSG FLSDIIAQVY KEYKVTATAE LLDRMKDLGY YESTKSGLTV
      661 GIADVTVLKE KPEIIEQAHK NVATVAKQFR RGLITDEERY NRVISIWNKA KDDIQAKLVE
      721 NMDPSNPIQM MSDSGARGNI SNFTQLSGMR GLMAAPNGKT MELPVISNFR EGLSVLEMFL
      781 SSHGARKGMT DTALKTANSG YLTRRLVDVA QDVIIREEDC HTDRGLDVTA ITEGNEMIEP
      841 LYDRILGRYT MKEVKDPNTG EIIVPANVLV EESEARKIVD AGVQKVTIRS AFTCNTRHGV
      901 CERCYGRNLA TGDEVEVGEA VGTVAAQSIG EPGTQLTMRN FHQGGVAGGD DITQGLPRVQ
      961 ELFEARNPKG RAVITEVTGV VDTVEENPAE RTKEVTVKGE TDTRTYSLPF TSVLKVKEGD
     1021 QVHRGDALTV GSIDPKELIK VRDVLSTENY ILREVQKVYR MQGVDISDKH IEIMTRQMLR
     1081 KVRIMDPGDT DMLPGTLLDI SQFKDRNTSA IIEGRIPATA RPVLLGITKA ALETNSFLSA
     1141 ASFQETTRVL TDAAIRGKND PLVGLKENVI IGKTIPAGTG MKKYHDIEPE VVNSNVTDGV
     1201 YSISELEEKI NEQQNNVESS N
//