LOCUS ABA58980.1 1336 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Ribonucleoside-diphosphate
reductase protein.
ACCESSION CP000127-2426
PROTEIN_ID ABA58980.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2527"
/EC_number="1.17.4.1"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000788"
/db_xref="InterPro:IPR003587"
/db_xref="InterPro:IPR004042"
/db_xref="InterPro:IPR005144"
/db_xref="InterPro:IPR006141"
/db_xref="InterPro:IPR006142"
BEGIN
1 MKTESSTTMS YPQEQTHDPE ALDPTVRVTA PGQYRVIRRN GKVTGFDPSK IAVAMTKAFL
61 ALEGNGAAMS KRIHQTVEVL TEQVVEACTR RLETGGTVHI EGIQDQVELA LMRGGHHKIA
121 RAYVLYREER ARERAQTAAK NKKKTIEPPI QVTLADGRTA PLDKARLTRI VEEACQNLPE
181 TQPQAIINET LRNLFDGVAE QDVERALIMS ARTFIEKEPN YSYTTARLLL DSLRREALSF
241 IHGMETHATQ QEMIERYPEY FAAYIRQGAE IQLIDSRLTQ YDLTRLGQAL RPERDFQFTY
301 LGLQTLYDRY FIHSGGTRFE LPQAFFMRVA MGLAINEIER EERAIEFYEL LSSFDFMSST
361 PTLFNSGSLR PQLSSCYLTT VPDDLDGIYS AIKDNALLSK YAGGLGNDWT RVRGMGAHIK
421 GTNGKSQGVV PFLKVTNDTA VAVNQCLAPN TLVHTAEGIK SIKAIQAGDL VLSQCGEYRE
481 VTRKFAYNQT EAMVELNIKH GIEPLKVTTG HPFWALRGVP MEQSSYRTLS WLARGKIQPE
541 WVEAGKLSKG DYVAQVIPKE IVPVADFTED DARLYGILLG DGHLCKKGGE WGVSGNPRRD
601 HHLQFVRHYL EVRGIHYWEI SRGTRYAQIR WASGRGAVRN ATTGRIVGAG APTLPFTRDD
661 LYDHTENKRI HHRLSHLPRR QTLALVQGLL ETDGGVSRNK EIYFTSTSFL LAEGLRYQLL
721 RLGVPTAGQY RERQQGHSGQ RSDGSEIRFN GICRAVDVRI PAVSEIAERL GCRALTKHNW
781 IEYNGFLFTR LRSARDISPL PFVYDLKVEG DPSYMTTTAL VHNGGKRKGA VCAYLETWHI
841 DIEEFLELRK NTGDDRRRTH DMNTANWVPD LFMKRVAEDG GWTLFSPDET PDLHDLVGQA
901 FEAAYLGYED KASRGEIKNF KKRRAVDLWR KMLSMLFETG HPWIAFKDPC NLRSPQQHAG
961 VVHSSNLCTE ITLNTSDDEI AVCNLGSINL PQHLDEDGLN LPKLEKTITT AMRMLDNVID
1021 YNYYSVPTAR RSNLRHRPVG LGLMGFQDAL YKRRIPYASE AAVEFADHSM EAISYYAIKA
1081 SSNLAAERGS YHTFEGSLWS QGLLPIDSIS LLEESRGSYF QQDRSHTLDW DSLREQVKTV
1141 GMRNSNCMAI APTATISNIC GVSQSIEPTY QNLFVKSNLS GEFTVINPYL VQDLKAQNLW
1201 DEVMVNDLKY FDGSAQPIDR IPEELKTLYA TAFEIDPRWL VEAASRRQKW LDQAQSLNLY
1261 MAEPNGKKLD NLYKLAWVRG LKTTYYLRSL GATHVEKSTM TSDQANKLNA VQSGYIQKSE
1321 APQACSVQDP DCEACQ
//