LOCUS ABA58611.1 1158 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 MscS Mechanosensitive
ion channel protein.
ACCESSION CP000127-2057
PROTEIN_ID ABA58611.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2151"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR006685"
/db_xref="InterPro:IPR006686"
BEGIN
1 MLNDKDVLFV LRLFLALIFF IPPALWAELS SVTSPDGLNS FIALEQVRNK MRELEEVQGL
61 DEAQKKKLLD LYQLTKERLQ TAQGYGDKAR VYRQAIEAAP AKIEEINRHL ASPGIDKAMA
121 ALEQIPGETP LSELEQQLAA EQAGLATLES SLAGLEKQWQ EQQSRPRQAR DQLTEAKQQQ
181 ERIENDLKAL PPGETSLISE ARQLALQARL EVYLNEINML DQELSSHNVR LQALKAQRDL
241 TAQQVWQTQA RVKFLEALIR QRRREEVGQA QEAAARAEWE AAGKHPAIQE LAAQNARLSK
301 EFATLATRLS RITAEHEAAE AHLKQMEQDF KNARQSLEIA GLNKALQQFL QDQRRSLPDL
361 SHYQEETEQH RVEMAEVGLS QLRVDGQRRQ LNKLEDAVTQ VIAEQVGPGL APSPREEIKV
421 EVRNLLKGRQ ILLDKLSAIQ SQYLRSVGNL EFIQQQLMER ARQYAVFLDE HLLWIPSAAP
481 LDFQTGQDLL AGMVWLLSLE SWQDTARALG SIAMEEPLLI IVVILIFIGL LQVRYNLGGT
541 LKTTTERITM PYADRFSFTL RAFIVTLLAA APWPLLVGFI GWLLRVSPEV PGFAKAVGAG
601 LTAISLPLFL MHGFRLLCRS HGVAIDHFGW QQQTVTLWRK NLTWVIPVML PALFVATVAG
661 AEANEIYAES LGRVGLLVSM VALAVFFQRI LRPKGGIAER YLDEQPRSWL SRFRYVWYPA
721 IVFLPISLAG LAMVGYFYTA LHLKNEIVVT LYLIIAAALV HDLAIRWLEV TQRKLALLKM
781 RERREIERVT QSTREAAGRS GAGIPTKLDI YQVDIQTVDS QTRQLLRTVV GLSIIVGFWL
841 IWAPTFPALG ILNDITLWHH TAVVEGQEVQ KPFTLANLAL ALVLALVAFG AARNLPGVLE
901 IVVLRRLSLV PGSRYAITTL LRYAIGSAGI VLVFDAIGGS WSQIQWLVAA LTVGLGFGLQ
961 EIFANFVSGL IILFERPIRV GDVVTVGDIS GTVSRIRIRA TTVTDFDRKE LIVPNKSFVT
1021 DRLVNWTLSD PITRITLKMG VAYGSDTTLT HQIILGVVNA NPLVLEDPPP SVYFVGFGEG
1081 TLDFIVWAFV RELGNRYPLM HELNTAINRA LGEQGIEIPF PQRDIHVRSV NMPALNGLGS
1141 QRAPEADCPP SQQEDSVT
//