LOCUS ABA58019.1 1074 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Heavy metal efflux pump protein.
ACCESSION CP000127-1463
PROTEIN_ID ABA58019.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1535"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR001036"
/db_xref="InterPro:IPR004763"
BEGIN
1 MVSEHQGKGH PPAEGTDLSA LQRLIGYCAR NRLLTLVAIA TLAFGGYRAL IQAPLDAIPD
61 LSDVQVILFT EWPGRSPDLV EDQITYPLTT TLLAAPGVNY VRGQSFFGLS FVYVIFEDGV
121 DMYWARSRVL EYLNSATADL PENVNPTLGP DATGVGWVYQ YALRDTSGRH NLAELRSLQD
181 FNLRYALEAI EGVAEVASVG GYKREYQISL DPNKLASLDI PLKRVVEAVR AVNNEVGGRL
241 LEVAGYEHFI RGRGYVQSVT DLEQVVLKTT TGGVPLTLKE VGTVALGPAM QRGQAELDGE
301 GVTVGGIVVM RYGENALSVI NRVKQRMAEI KPGLPEGVEI VPVYDRSTLI KQAIDTLQKT
361 LIEEMIIVSL VILAFLLHLR SALVAVITLP VAVLIAFIPM AYQGLTANIM SLGGIAVAIG
421 AMVDAAIVII DNIHKRLHQW QAGDTPSEER AKSRIDVVIE AMQEVGPSIF FSLLIITVSF
481 LPVFALEGTE GRLFKPLAYT KTYSMAFAAL LSLTLIPALA VWLIRGRIRA DRSRLNRWLV
541 AAYRPMVRLA IQLRWWVVGL AVIALFATVI PFRSLGTEFM PPLNEGSILY MPTALPGMSI
601 TEATQTLQTM DRIIAGIPEV EHVFGKVGRA TSATDPAPLS MVETVITLKP KKQWRQGLAW
661 EDLIQELDQK LRFPGMPNIF WMPIQTRTEM LATGIRSALG IKVFGPDLAT IEKTGIAIEK
721 ILQNDPRTTP HTRSAFAERT TGGYFLDFTI HRVSAARFGL NVEDVQRVIM AAIGGAVVSQ
781 TVEGRERYNI LVRYGRNYRD NIAALERVLV ATPTGAQIPI TQVADIAFTT GPPAIRSEDG
841 QLVGFVFVDV KPSIGIADYV ALAKQAVADR AAIPAGYRLE WAGQFQYFEQ AKAKLQVLLP
901 ATLFLIFFML FMHRGSLTET FIIMVSVPFS LVGAVWLLWF LDYKLSVAVW VGMIAVAGLA
961 VELGLLMMVY LDLAYRARWA EGRLRTRGDL REVIQEGASM RIRPMLMTGM TLFVGLMPIL
1021 WSTGSGADVM QRIAAPMIGG VISALAMVLI VFPAIFAIWK RRRLRVNRGG TTIT
//