LOCUS ABA56897.1 1262 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Protein of unknown function
DUF490 protein.
ACCESSION CP000127-341
PROTEIN_ID ABA56897.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0371"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR007452"
BEGIN
1 MKLLRSIGAF ILLLLVLLVG GLAYLLLTEV GTRQLLAQVA QVIPGELETQ QVEGTLGEAL
61 TLTGLRYRTP DFTLEVGYFH FAWRPAALLG ATFWVEQLHL GEVSWRQKRP GESTASQEPI
121 VLPEIQIPLK AKAEDVRLQN ISLTPLGSSP VVINTIVFKG NFDGQALQVG ELGVSAPQGE
181 VQVSGEMAFQ EAYPMAFALA WGAPVPELGK VTGIGRVKGD LRQLTLHQTV QAPFHLQFRS
241 RLFELLEQPR WVAALEVPGV ELQHLSAQWP AVRFGLDLKG AGSLEQFKVR ASYQIQEAQT
301 GEVRGSLSVE QLAMGHWLLD RLTLRQVEGP ARLALRGEVM MAEDQPRMSL AGQWQDMAWP
361 LRGTAQVSSN RGQLTLEGTP AAYRLQLNSA LAGQDIPTSE WHLMGTGDTT QFELEKLRGQ
421 LLDGVLSGSG NFRWTPALAW DVRVDGEALN LSKEWPEWPG VLSFSSDTNG VLEEDAQDIT
481 LDLHALSGSL RGYPVAAQGR VQRQDNTWRI ADLKLRSGDS RLSLGGTVNE RLALKWHLSS
541 PDLSQLLPEA QGDLLVKGHA KGPLTGPELT FRLQGKALAY QDYQVESVMA NVDVDLQGKQ
601 SSQVRIDASD FTLADQTLRS VAIEGGGTPL HHKLSLAVKA PERSLDLGFQ GSWKEEVWQG
661 EITKTELTDS LMGHWEAVSA TSLTLSRSNI DLAPWCWRQQ SAQLCLGGSW QEESFWRGSF
721 KLEDFPLAML GPLLPEKTAL EGVIGGEVQA QGEAHQLVQA RMQLAASGVQ LTQVTPEGQS
781 LRFPYQDMQA RLNLEDRGGK AGFELLSADP GTAPVRASLR LPSAPLDLTA LGQLPLDGQI
841 SMAFRDLAFL ETLIPELEAV QGQLRADLTL GGQVAAPQLL GEVVLQEGSA QVVPLGLKLI
901 KIRLRAEASE QDRIVFTGGV HSGEGELAVN GQVRLEPEAG WPAKVTVTGE RFEAMGTSDI
961 RVLISPQLQI TKAEEAIRVE GEVVIPEATL VIKDIESRGG VPVSQDVVII SQEKETEKKA
1021 VPIYARVRII LGDDISVRAF GFKGGITGSL LVTETPGKAT RGSGELQIVK GEYKAYGQQL
1081 NIRQGQVVFA GPIDDPRLSV EAVREVDNGN IVVGARIRGA ASEPVLTLFS EPSMDESNIL
1141 AYLILGRPLA GASGGDGELL TKAATSLGLS GGTLLAKRLG KIFGLEDVGI ESADNGNGNG
1201 DTQSEMLMLG KQLSPSLYIG YGIGLFERFS SFRMRYILSK NWSVQAETGL ETGADLFYSL
1261 ER
//