LOCUS ABA56823.1 1041 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Heavy metal efflux pump protein.
ACCESSION CP000127-267
PROTEIN_ID ABA56823.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0294"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR001036"
/db_xref="InterPro:IPR004763"
BEGIN
1 MVTLTEAAMI AKIIQWSLKQ PLLVLLSAAA LLGWGSIEAL RMPVDVFPDL TTPRVTVVVE
61 AHGMAPEEVE VLITFPLETA FNSAMGVRRV RSSSGVGFAV ITVEFDWGMG IYRARQIVAE
121 KLQLVRGALP PDIPPPVMQP VTSIMGEIMF IALTSERHSA MELKTQADWV VRHRLLAVPG
181 VAQVIPIGGD TKQYQVILKP ERLVAYDIAM DEVVAALRET NQNISAGFYV EGGQEHLIHG
241 IGRVQRLEDI RETLIGQRGG QSVLVRHVAE VALGPAPKRG TGALNGEAAV IIGIQKQPGT
301 NTLALTARLD QVLAELQASL PSGMIFNTHI FRQADFITVS INNLLAALRD GAILVAAIVF
361 AFLMSTRASV ITLLAVPLSL VTVILVMKAL GTTFNTMTLG GMTIALGALV DDAIIVMENI
421 VRRLRENQQR DKGQRRSTGK VVFEATREIQ GSIVFATLII VLVFLPLVFL SGVEGRLMQP
481 LGVAYVVSLA ASLLVAITVT PVLSALLLPQ ARIVQASREI SLARSLKRHY ERLLAATITQ
541 WKVITLIAMT ALAAALITLA GVGQVLLPSF NEGSLTINTM TLPGTSLEQS DRLGQRVEKI
601 LLSYPEVVST ARRTGRAELD PNAQAIYASE IDVNLRQGER SKEAFLAALR ADLARLPGMQ
661 INIGQPISHR IDHMLSGTRA NIAVKIFGPD LYELRRLGQQ VKAVMAGVPG VVDLAVQQQT
721 DIPFLTIRFK RQAIARHGLR VQEVAEAVKG AFYGQPVSKI LEGRANFDLV VRYDPRVKAD
781 LEAVRATLMT TGSGAHLPLH ALAEIRKDRS PNFISREDVQ RKMVVMANVA GRDLVSAVEE
841 IQQGVRQSLS LPAGYHVEYG GQFKSAKAAF RTLSIVSVLV ILGIFLLLFM AFNSARDAFL
901 VMLNLPLALI GGVVGVYFSG GILSVASIIG FITLFGIATR NGVMMIAHIH HLVERERVRD
961 PMTAVIRGAK ERLIPILMTA LATALALIPL ALGAGEPGSE IQAPMAMVIL FGLLTSTALN
1021 MMVVPALYLR FGVASQKLRH P
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