LOCUS AAZ20892.1 1523 aa PRT BCT 31-JAN-2014 DEFINITION Candidatus Pelagibacter ubique HTCC1062 Type II Secretion PilY1 protein. ACCESSION CP000084-67 PROTEIN_ID AAZ20892.1 SOURCE Candidatus Pelagibacter ubique HTCC1062 ORGANISM Candidatus Pelagibacter ubique HTCC1062 Bacteria; Pseudomonadota; Alphaproteobacteria; Candidatus Pelagibacterales; Candidatus Pelagibacteraceae; Pelagibacter. REFERENCE 1 (bases 1 to 1308759) AUTHORS Giovannoni,S.J., Tripp,H.J., Givan,S., Podar,M., Vergin,K.L., Baptista,D., Bibbs,L., Eads,J., Richardson,T.H., Noordewier,M., Rappe,M.S., Short,J.M., Carrington,J.C. and Mathur,E.J. TITLE Genome streamlining in a cosmopolitan oceanic bacterium JOURNAL Science 309 (5738), 1242-1245 (2005) PUBMED 16109880 REFERENCE 2 (bases 1 to 1308759) AUTHORS Giovannoni,S.J., Bibbs,L., Cho,J.C., Stapels,M.D., Desiderio,R., Vergin,K.L., Rappe,M.S., Laney,S., Wilhelm,L.J., Tripp,H.J., Mathur,E.J. and Barofsky,D.F. TITLE Proteorhodopsin in the ubiquitous marine bacterium SAR11 JOURNAL Nature 438 (7064), 82-85 (2005) PUBMED 16267553 REFERENCE 3 (bases 1 to 1308759) AUTHORS Giovannoni,S.J., Tripp,H.J., Givan,S.A., Podar,M., Vergin,K.L., Baptista,D., Bibbs,L., Eads,J., Richardson,T.H., Noordweir,M., Rappe,M.S., Short,J., Carrington,J.C. and Mathur,E.J. TITLE Direct Submission JOURNAL Submitted (07-JUL-2005) Microbiology, Oregon State University, Corvallis, OR 97331, USA FEATURES Qualifiers source /organism="Candidatus Pelagibacter ubique HTCC1062" /mol_type="genomic DNA" /strain="HTCC1062" /type_material="reference material of Candidatus Pelagibacter ubique" /db_xref="taxon:335992" protein /gene="pilY1" /locus_tag="SAR11_0068" /note="Type IV fimbrial biogenesis protein, PilY1" /transl_table=11 BEGIN 1 MRRTLGDGIP VISSAAIDGN GNRVLTSADK SLGGLYLFNS AGERINFTGT NQSGGSYTRD 61 TWWAGSNTDQ RCDYRLRDGS RTTNHLISTT RKYHEARYVT GVTVPGTNIS NENLLFAVQF 121 DDGSSSVAVI ALDTQYRCRL ALTVNSVKHI RGMDISANAA GHIIVGVFGR SGRKNAFQMT 181 CNLNQADCEE ITGRGKGQTD VFGRIYDGNR YRLNSDSTRM YISDDGNLYE YATRNVGGQN 241 VISYAWGEKK ECRASRNSTI NQITQFELSS NDDDIFFVGG SGRELVRVQW TAGYNICTRI 301 TGLGTASSLS NAGQAAGNLA ADSVRVTNAL TAISKSGGRI LFSHNSYVDE LTEANFTSAN 361 RNTAWQIQYG GPKITRLDGA KAAIIAVLTD STLTSGANFG FGHWNAGEGS QGKTGRRGGK 421 YCHGSGTSCN YYGGWSGNHP AGQSRICTGN SCLNVGIGPE GAGNAIPVVE RLGVEWGTDS 481 EAFSQIAHDY FFGPVSPHDP NSDCQLNYVI VIGDGEMSGT GTASTSFQGR TAGRLTRMRE 541 ELGIKTLMVA YGDGIKASGM NRFNELALVG SCDAAGGEDC EQTIVATTPL ELQTELQQKI 601 RQILAERLAF TAPSITATIQ QGGSLYQAQF AYEQFGEWKG TILRKTLNAD GTVEHDPNAP 661 GNWDAAARVR TQAAGGPTDP GTADSRNIWT PIADQSLDYL GNWDNVNEAT APTLEPEMER 721 LGYVLRNYHS STSKCGGDDT TDDERDGILR FLAGQDFFDY DGDCDTTELR SHVLGDIYHS 781 QLIEIGAPDG NTQFTDNNQE AYFRTINNYQ AFKASQQSRR NILYAGSNSG LLHAFSAETG 841 NEEWAFLPPF LIGKLPTLIN SRLDGAIDGF KGGSNAVFGV DGSPVVHDVF MKGLTPEGDV 901 EGSASWHTIL FQPFGRGGSG FSVLDVTTPL VRDGLGPMHM FSVYNDYINN VVYIMDNEGE 961 VRELEYFSSS AEISASDEAL KAQSNFNEAV TADEAIDSET TTNQDAIAVC QSDADVTGEF 1021 KTAGTASCYI GRTFTFSDIS FNTPNNQSIP ENMINVSEMV DGEFLPVEFS DARMIDGQFV 1081 ITFDEDKIYN PGGSVNETRE TTNIFVQTSC TSSSGIDPFF DYSKLGETWS TPRIVRLPSD 1141 IEAEREDPAN DKYVAIMGAG MANNNLCAGS ALFMVELDNM DEPGKLYGGD QNGGPITIVD 1201 TSPSGVALGN DIIETPNGSN INNAVPTSPL VITPDTGFGI PWRGAMVYIN DREGKITKIN 1261 LTDSTKNDAK LFDQTTLFRL NASTTNKRYT FFSMDAGVGV TTKDFWLFGG TGDFNKLGDI 1321 DRNMDNILYG IRDFDYPYFK HLNGVTIPSF DDQAFTSTAH QGADNAKSID DATVCSDVTG 1381 DTDASLCPDS AESAWVIHLD TQGDNNSHRK ASAPPTLFKG QVYFPVYEPP PGSNRCNIGN 1441 AYICVADDEC GTNNSHKLVK GAEANGSNCT FIREGVLSEL VIFGDKLYAN VAGPSEDSDT 1501 LYSVIAVPGE ILSNTGGWRD TGY //