LOCUS       AAZ20892.1              1523 aa    PRT              BCT 31-JAN-2014
DEFINITION  Candidatus Pelagibacter ubique HTCC1062 Type II Secretion
            PilY1 protein.
ACCESSION   CP000084-67
PROTEIN_ID  AAZ20892.1
SOURCE      Candidatus Pelagibacter ubique HTCC1062
  ORGANISM  Candidatus Pelagibacter ubique HTCC1062
            Bacteria; Pseudomonadota; Alphaproteobacteria; Candidatus
            Pelagibacterales; Candidatus Pelagibacteraceae; Pelagibacter.
REFERENCE   1  (bases 1 to 1308759)
  AUTHORS   Giovannoni,S.J., Tripp,H.J., Givan,S., Podar,M., Vergin,K.L.,
            Baptista,D., Bibbs,L., Eads,J., Richardson,T.H., Noordewier,M.,
            Rappe,M.S., Short,J.M., Carrington,J.C. and Mathur,E.J.
  TITLE     Genome streamlining in a cosmopolitan oceanic bacterium
  JOURNAL   Science 309 (5738), 1242-1245 (2005)
   PUBMED   16109880
REFERENCE   2  (bases 1 to 1308759)
  AUTHORS   Giovannoni,S.J., Bibbs,L., Cho,J.C., Stapels,M.D., Desiderio,R.,
            Vergin,K.L., Rappe,M.S., Laney,S., Wilhelm,L.J., Tripp,H.J.,
            Mathur,E.J. and Barofsky,D.F.
  TITLE     Proteorhodopsin in the ubiquitous marine bacterium SAR11
  JOURNAL   Nature 438 (7064), 82-85 (2005)
   PUBMED   16267553
REFERENCE   3  (bases 1 to 1308759)
  AUTHORS   Giovannoni,S.J., Tripp,H.J., Givan,S.A., Podar,M., Vergin,K.L.,
            Baptista,D., Bibbs,L., Eads,J., Richardson,T.H., Noordweir,M.,
            Rappe,M.S., Short,J., Carrington,J.C. and Mathur,E.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2005) Microbiology, Oregon State University,
            Corvallis, OR 97331, USA
FEATURES             Qualifiers
     source          /organism="Candidatus Pelagibacter ubique HTCC1062"
                     /mol_type="genomic DNA"
                     /strain="HTCC1062"
                     /type_material="reference material of Candidatus
                     Pelagibacter ubique"
                     /db_xref="taxon:335992"
     protein         /gene="pilY1"
                     /locus_tag="SAR11_0068"
                     /note="Type IV fimbrial biogenesis protein, PilY1"
                     /transl_table=11
BEGIN
        1 MRRTLGDGIP VISSAAIDGN GNRVLTSADK SLGGLYLFNS AGERINFTGT NQSGGSYTRD
       61 TWWAGSNTDQ RCDYRLRDGS RTTNHLISTT RKYHEARYVT GVTVPGTNIS NENLLFAVQF
      121 DDGSSSVAVI ALDTQYRCRL ALTVNSVKHI RGMDISANAA GHIIVGVFGR SGRKNAFQMT
      181 CNLNQADCEE ITGRGKGQTD VFGRIYDGNR YRLNSDSTRM YISDDGNLYE YATRNVGGQN
      241 VISYAWGEKK ECRASRNSTI NQITQFELSS NDDDIFFVGG SGRELVRVQW TAGYNICTRI
      301 TGLGTASSLS NAGQAAGNLA ADSVRVTNAL TAISKSGGRI LFSHNSYVDE LTEANFTSAN
      361 RNTAWQIQYG GPKITRLDGA KAAIIAVLTD STLTSGANFG FGHWNAGEGS QGKTGRRGGK
      421 YCHGSGTSCN YYGGWSGNHP AGQSRICTGN SCLNVGIGPE GAGNAIPVVE RLGVEWGTDS
      481 EAFSQIAHDY FFGPVSPHDP NSDCQLNYVI VIGDGEMSGT GTASTSFQGR TAGRLTRMRE
      541 ELGIKTLMVA YGDGIKASGM NRFNELALVG SCDAAGGEDC EQTIVATTPL ELQTELQQKI
      601 RQILAERLAF TAPSITATIQ QGGSLYQAQF AYEQFGEWKG TILRKTLNAD GTVEHDPNAP
      661 GNWDAAARVR TQAAGGPTDP GTADSRNIWT PIADQSLDYL GNWDNVNEAT APTLEPEMER
      721 LGYVLRNYHS STSKCGGDDT TDDERDGILR FLAGQDFFDY DGDCDTTELR SHVLGDIYHS
      781 QLIEIGAPDG NTQFTDNNQE AYFRTINNYQ AFKASQQSRR NILYAGSNSG LLHAFSAETG
      841 NEEWAFLPPF LIGKLPTLIN SRLDGAIDGF KGGSNAVFGV DGSPVVHDVF MKGLTPEGDV
      901 EGSASWHTIL FQPFGRGGSG FSVLDVTTPL VRDGLGPMHM FSVYNDYINN VVYIMDNEGE
      961 VRELEYFSSS AEISASDEAL KAQSNFNEAV TADEAIDSET TTNQDAIAVC QSDADVTGEF
     1021 KTAGTASCYI GRTFTFSDIS FNTPNNQSIP ENMINVSEMV DGEFLPVEFS DARMIDGQFV
     1081 ITFDEDKIYN PGGSVNETRE TTNIFVQTSC TSSSGIDPFF DYSKLGETWS TPRIVRLPSD
     1141 IEAEREDPAN DKYVAIMGAG MANNNLCAGS ALFMVELDNM DEPGKLYGGD QNGGPITIVD
     1201 TSPSGVALGN DIIETPNGSN INNAVPTSPL VITPDTGFGI PWRGAMVYIN DREGKITKIN
     1261 LTDSTKNDAK LFDQTTLFRL NASTTNKRYT FFSMDAGVGV TTKDFWLFGG TGDFNKLGDI
     1321 DRNMDNILYG IRDFDYPYFK HLNGVTIPSF DDQAFTSTAH QGADNAKSID DATVCSDVTG
     1381 DTDASLCPDS AESAWVIHLD TQGDNNSHRK ASAPPTLFKG QVYFPVYEPP PGSNRCNIGN
     1441 AYICVADDEC GTNNSHKLVK GAEANGSNCT FIREGVLSEL VIFGDKLYAN VAGPSEDSDT
     1501 LYSVIAVPGE ILSNTGGWRD TGY
//