LOCUS AAT77590.1 931 aa PRT ROD 05-JUN-2007 DEFINITION Rattus norvegicus protocadherin gamma a1 protein. ACCESSION AY574008-1 PROTEIN_ID AAT77590.1 SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 4548) AUTHORS Zhang,T., Haws,P. and Wu,Q. TITLE Multiple variable first exons: a mechanism for cell- and tissue-specific gene regulation JOURNAL Genome Res. 14 (1), 79-89 (2004) PUBMED 14672974 REFERENCE 2 (bases 1 to 4548) AUTHORS Wu,Q. TITLE Comparative genomics and diversifying selection of the clustered vertebrate protocadherin genes JOURNAL Genetics 169 (4), 2179-2188 (2005) PUBMED 15744052 REFERENCE 3 (bases 1 to 4548) AUTHORS Zou,C., Huang,W., Ying,G. and Wu,Q. TITLE Sequence analysis and expression mapping of the rat clustered protocadherin gene repertoires JOURNAL Neuroscience 144 (2), 579-603 (2007) PUBMED 17110050 REFERENCE 4 (bases 1 to 4548) AUTHORS Wu,Q. TITLE Direct Submission JOURNAL Submitted (16-MAR-2004) Department of Human Genetics, Eccles Institute of Human Genetics, 15 North 2030 East, Salt Lake City, UT 84112, USA FEATURES Qualifiers source /organism="Rattus norvegicus" /mol_type="mRNA" /strain="BN" /db_xref="taxon:10116" protein /gene="Pcdhga1" /note="PCDHGA1; a member of the protocadherin gamma cluster" BEGIN 1 MAIPEKLTGW SLLMLLCLSL ELLLEAGAGN IRYSVPEETD KGSFVGSIAK DLGLETRELA 61 ERRIRIVSRG RSQLFSLNPR SGSLVTAGRI DREELCAQSV PCVVSFNILM EDKVKLVPIE 121 VEIIDINDNT PQFQLEELEL KMSEITTPGT RIPLPLGQDL DVGINSLQSY QLSANPHFFL 181 DVQQGPDGPQ QPEMVLQRPL DREKDAVHYL ILTASDGGNP IHSGTLQIHV QVVDVNDNPP 241 AFTQAEYHVR VPENVPLGTR LLKVNASDPD EGANGRVTYS FHNVDHSVVR KFQLDSYTGE 301 LSNKEPLDFE EYKVYPMEIQ AQDGAGLMAR AKVLVTVLDV NDNAPEIGVT SVTTTIPENF 361 PPGTIVALIS VHDQDADDNG HTTCSIPGNL PFKLEKLVDN YYRLVTERTL DREHSSRYNI 421 TITATDQGTP PLSTQAHISL LVTDINDNPP VFEQDSYSVY IPENNPRGAS IFSVKAQDAD 481 HNENALVTYA LVEDTIQGVP LSSYFSINSD TGVVYALQSF DYEQFRDLQL RVMARDSGNP 541 QLSSNVSLSL FMIDQNDNAP EILYPVLPTD GSTGVELAPR SAEPGYLVTK VVAVDKDSGQ 601 NSWLSYRLLK ASEPGLFSVG LHTGEVRTAR ALLDRDALKQ SLVVAVQDHG QPPLSTTVTF 661 TIAVADNIPD LLADLGSIGT PADPQDSDLT LYLVVAVAVV SCIFLAFVIV LLVLKLRHWH 721 SSRLLQTAAN GLTDLPTSNF VGVDGVHAFL QTYSHEISLT ADSRKSHLIF PQPNYADTLI 781 SQESCEKKEF LSAPQSLLED KEEIFSQQAP PNTDWRFSQA QRPGTSGSQN GDETGTWPNN 841 QFDTEMLQAM ILASASEAAD GSSTLGGGTG TMGLSARYGP QFTLQHVPDY RQNVYIPGSN 901 ATLTNAAGKR DGKAPAGGNG NKKKSGKKEK K //