LOCUS AAL22355.1 858 aa PRT BCT 24-JUL-2018 DEFINITION Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 transpeptidase of penicillin-binding protein 1a protein. ACCESSION AE006468-3391 PROTEIN_ID AAL22355.1 SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (bases 1 to 4857450) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (bases 1 to 4857450) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA REFERENCE 3 (bases 1 to 4857450) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter COMMENT On Jan 13, 2016 this sequence version replaced AE006468.1. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. FEATURES Qualifiers source /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /mol_type="genomic DNA" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus source /organism="Salmonella phage Fels-1" /mol_type="genomic DNA" /db_xref="taxon:128975" source /organism="Phage Gifsy-2" /mol_type="genomic DNA" /db_xref="taxon:129862" source /organism="Phage Gifsy-1" /mol_type="genomic DNA" /db_xref="taxon:129861" source /organism="Salmonella virus Fels2" /mol_type="genomic DNA" /db_xref="taxon:194701" protein /gene="mrcA" /locus_tag="STM3493" /note="similar to E. coli peptidoglycan synthetase; penicillin-binding protein 1A (AAC76421.1); Blastp hit to AAC76421.1 (858 aa), 92% identity in aa 1 - 858" /transl_table=11 BEGIN 1 MTLNGKSPVK FVKYLLILAV CCILLGAGSI YGLYRYIEPQ LPDVATLKDV RLQIPMQVYS 61 ADGELIAQYG EKRRIPVTLD QIPPEMINAF IATEDSRFYE HHGIDPVGIF RAASVALFSG 121 HASQGASTIT QQLARNFFLS PERTLMRKIK EAFLAIRIEQ LLNKNEILEL YLNKIYLGYR 181 AYGVGAAAQV YFGKTVDQLS LSEMAVIAGL PKAPSTFNPL YSMDRAIARR NVVLSRMLSE 241 GYITQAQYDQ ARSEPIDANY HAPEIAFSAP YLSEMVRQEM YNRYGESAYE DGYRIYTTIT 301 RKVQQAAQQA VRNNVLDYDM RHGYRGPANV LWKVGETAWD SKKITDTLKA LPTYGPLLPA 361 VVTSANPQEA TAALADGTSV SLHMEGMRWA RPYRSDTQQG PTPRKVTDVV QTGQQIWVRQ 421 VDNDWWLAQV PEVNSALVSL NPQTGAVLAL VGGFDFNQSK FNRATQALRQ VGSNIKPFLY 481 TAAMDKGLTL ASMLNDVPIS RWDAGAGSDW RPKNSPPQYA GPIRLRQGLG QSKNVVMVRA 541 MRAMGVDYAA EYLQRFGFPA QNIVHTESLA LGSASFTPMQ VARGYAVMAN GGFLIDPYFI 601 SKIENDQGGV IFEAKPKIAC PECDIPVIYG NTQKSDVLEN TNVEEVAVSQ EQQNSAVPMP 661 ELEQANQALV AQNGTQEYAP HVINTPLAFL IKSALNTNIF GEPGWMGTGW RAARDLKRRD 721 IGGKTGTTNS SKDAWFSGYG PGVVTSVWIG FDDHRRDLGR TTASGAIKDQ ISGYEGGAKS 781 AQPAWDAYMK AVLEGVPEQP LTPPPGIVTV NIDRSTGQLA SGGNSREEYF IEGTQPTQQA 841 VHEVGTTIID NGETHELF //