LOCUS AAL21989.1 711 aa PRT BCT 24-JUL-2018 DEFINITION Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ornithine decarboxylase isozyme protein. ACCESSION AE006468-3025 PROTEIN_ID AAL21989.1 SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (bases 1 to 4857450) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (bases 1 to 4857450) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA REFERENCE 3 (bases 1 to 4857450) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter COMMENT On Jan 13, 2016 this sequence version replaced AE006468.1. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. FEATURES Qualifiers source /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /mol_type="genomic DNA" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus source /organism="Salmonella phage Fels-1" /mol_type="genomic DNA" /db_xref="taxon:128975" source /organism="Phage Gifsy-2" /mol_type="genomic DNA" /db_xref="taxon:129862" source /organism="Phage Gifsy-1" /mol_type="genomic DNA" /db_xref="taxon:129861" source /organism="Salmonella virus Fels2" /mol_type="genomic DNA" /db_xref="taxon:194701" protein /gene="speC" /locus_tag="STM3114" /EC_number="4.1.1.17" /note="similar to E. coli ornithine decarboxylase isozyme (AAC76002.1); Blastp hit to AAC76002.1 (731 aa), 87% identity in aa 21 - 731" /transl_table=11 BEGIN 1 MKSMNIAASG ELIPRLSTHR NVVALDSTDF TDVAAVVITT ADSRSGILAL LKRTGFHLPV 61 FMLADEPVSA PVGVTAVIVG NAQEWLELEN AACRYEAELL PPFYGTLTQY VDMGNSTFAC 121 PGHQHGEFFR KHPAGRHFYD FFGENLFRAD MCNADVKLGD LLIHEGSAKH AQKFAAKVFN 181 ADKTYFVLNG TSAANKVVTN ALLTRGDLVL FDRNNHKSNH HGALIQAGAT PVYLEAARNP 241 FGFIGGIDAH CFDETYLRDQ IRDVMPESAD ASRPFRLAII QLGTYDGTIY NARQVVDKIG 301 HLCDYILFDS AWVGYEQFIN MMADTSPLRL ELNENDPGIF VTQSVHKQQA GFSQTSQIHK 361 KDNHIRGQAR FCPHKRLNNA FMLHASTSPF YPLFAALDVN AKIHEGESGR RLWAECVALG 421 IDARKAILAR CKLLQPFIPL VVDGKPWQAY PTETIASNRR FFSFEPGAKW HGFEGYADDQ 481 YFVDPCKLLL TTPGIDADSG RYTEFGIPAT ILAHYLRENG IVPEKCDLNS ILFLLTPAES 541 EEKLARLVAM LAQFERHIED DTPLADVLPT VFQKYPVRYR DYTLRELCQE MHNLYVSFDV 601 KDLQKAMFRK ESLPHVAMNP QDANSAFIRG DVELVRISEA GGRIAAEGAL PYPPGVLCVV 661 PGEIWGGAAQ RYFLALEEGI NLLPGFSPEL QGVYSETDAD GIQRLYGYVL K //