LOCUS AAI50597.1 2049 aa PRT HUM 18-MAR-2009
DEFINITION Homo sapiens GARNL1 protein protein.
ACCESSION BC150596-1
PROTEIN_ID AAI50597.1
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6328)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 6328)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 13 Row: G Column: 7
single stranded.
FEATURES Qualifiers
source /db_xref="H-InvDB:HIT000503292"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:183506 IMAGE:9056966"
/tissue_type="Testis, PCR rescued clones"
/clone_lib="NIH_MGC_375"
/lab_host="DH10B"
/note="Vector: pCR-XL-TOPO; Clone identification sequence
tag: CCAAGCTC"
protein /gene="GARNL1"
/gene_synonym="GRIPE"
/gene_synonym="TULIP1"
/db_xref="GeneID:253959"
/db_xref="HGNC:HGNC:17770"
/db_xref="MIM:608884"
BEGIN
1 MFSKKPHGDV KKSTQKVLDT KKDALTRLKH LRIVIENAES IDLKQFFDQH FSHIYYVFFE
61 NFVTIEASLK QKGHKSQREE LDAILFIFEK ILQLLPERIH QRWQFHSIGL ILKKLLHTGN
121 SLKIRREGVR LFLLWLQALQ NNCSKEQLWM FSCLIPGFSA PQSEHGPRTL DNLINPPLNL
181 QETQVTIEEI TPLVPPQSGD KGQEDLTSYF LEALLKYIVI QVKSLEWKNK ENQERGFSFL
241 FSHFKKYYLP YIFPNICKEN SLYHPILDIP QMRPKPHYVV IKKDAETNEA IYCTKEPFIK
301 ARVIVIRWLV SFWLEPKPHT GPHIPGMEGE VLPKNIQRAA ASLVSREESK NDNADKTDRT
361 TEPEQSHSNT STLTEREPSS SSLCSIDEEH LTDIEIVRRV FSSKRSNVNF VTEIFRQAFL
421 LPICEAAAMR KVVKVYQEWI QQEEKPLFMQ EPEEIVITSS DLPCIENVTD HDISMEEGEK
481 REEENGTNTA DHVRNSSWAK NGSYQGALHN ASEEATEQNI RAGTQAVLQV FIINSSNIFL
541 LEPANEIKNL LDEHTDMCKR ILNIYRYMVV QVSMDKKTWE QMLLVLLRVT ESVLKMPSQA
601 FLQFQGKKNM TLAGRLAGPL FQTLIVAWIK ANLNVYISRE LWDDLLSVLS SLTYWEELAT
661 EWSLTMETLT KVLARNLYSL DLSDLPLDKL SEQKQKKHKG KGVGHEFQKV SVDKSFSRGW
721 SRDQPGQAPM RQRSATTTGS PGTEKARSIV RQKTVDIDDA QILPRSTRVR HFSQSEETGN
781 EVFGALNEEQ PLPRSSSTSD ILEPFTVERA KEAEQNATRG STEGSVQSCN GLFWKESCSD
841 IGGSSANVPD LMDEFIAERL RSGNASTMTR RGSSPGSLEI PKDLPDILNK QNQMRPIDDP
901 GVPSEWTSPA SAGSSDLISS DSHSDSFSAF QYDGRKFDNF GFGTDTGVTS SADVDSGSGH
961 HQSAEEQEVA SLTTLHIDSE TSSLNQQAFS AEVATITGSE SASPVHSPLG SRSQTPSPST
1021 LNIDHMEQKD LQLDEKLHHS VLQTPDDLEI SEFPSECCSV MAGGTLTGWH ADVATVMWRR
1081 MLGILGDVNS IMDPEIHAQV FDYLCELWQN LAKIRDNLGI STDNLTSPSP PVLIPPLRIL
1141 TPWLFKATML TDKYKQGKLH AYKLICNTMK RRQDVSPNRD FLTHFYNIMH CGLLHIDQDI
1201 VNTIIKHCSP QFFSLGLPGA TMLIMDFIVA AGRVASSAFL NAPRVEAQVL LGSLVCFPNL
1261 YCELPSLHPN IPDVAVSQFT DVKELIIKTV LSSARDEPSG PARCVALCSL GIWICEELVH
1321 ESHHPQIKEA LNVICVSLKF TNKTVAHVAC NMLHMLVHYV PRLQIYQPDS PLKIIQILIA
1381 TITHLLPSTE ASSYEMDKRL VVSLLLCLLD WIMALPLKTL LQPFHATGAE SDKTEKSVLN
1441 CIYKVLHGCV YGAQCFSNPR YFPMSLSDLA SVDYDPFMHL ESLKEPEPLH SPDSERSSKL
1501 QPVTEVKTQM QHGLISIAAR TVITHLVNHL GHYPMSGGPA MLTSQVCENH DNHYSESTEL
1561 SPELFESPNI QFFVLNNTTL VSCIQIRSEE NMPGGGLSAG LASANSNVRI IVRDLSGKYS
1621 WDSAILYGPP PVSGLSEPTS FMLSLSHQEK PEEPPTSNEC LEDITVKDGL SLQFKRFRET
1681 VPTWDTIRDE EDVLDELLQY LGVTSPECLQ RTGISLNIPA PQPVCISEKQ ENDVINAILK
1741 QHTEEKEFVE KHFNDLNMKA VEQDEPIPQK PQSAFYYCRL LLSILGMNSW DKRRSFHLLK
1801 KNEKLLRELR NLDSRQCRET HKIAVFYVAE GQEDKHSILT NTGGSQAYED FVAGLGWEVN
1861 LTNHCGFMGG LQKNKSTGLT TPYFATSTVE VIFHVSTRMP SDSDDSLTKK LRHLGNDEVH
1921 IVWSEHTRDY RRGIIPTEFG DVLIVIYPMK NHMFSIQIMK KPEVPFFGPL FDGAIVNGKV
1981 LPIMVRATAI NASRALKSLI PLYQNFYEER ARYLQTIVQH HLEPTTFEDF AAQVFSPAPY
2041 HHLPSDADH
//