LOCUS AAG08358.1 627 aa PRT BCT 31-JAN-2014
DEFINITION Pseudomonas aeruginosa PAO1 thiamin biosynthesis protein
ThiC protein.
ACCESSION AE004091-4973
PROTEIN_ID AAG08358.1
SOURCE Pseudomonas aeruginosa PAO1
ORGANISM Pseudomonas aeruginosa PAO1
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6264404)
AUTHORS Stover,C.K., Pham,X.Q., Erwin,A.L., Mizoguchi,S.D., Warrener,P.,
Hickey,M.J., Brinkman,F.S., Hufnagle,W.O., Kowalik,D.J., Lagrou,M.,
Garber,R.L., Goltry,L., Tolentino,E., Westbrock-Wadman,S., Yuan,Y.,
Brody,L.L., Coulter,S.N., Folger,K.R., Kas,A., Larbig,K., Lim,R.,
Smith,K., Spencer,D., Wong,G.K., Wu,Z., Paulsen,I.T., Reizer,J.,
Saier,M.H., Hancock,R.E., Lory,S. and Olson,M.V.
TITLE Complete genome sequence of Pseudomonas aeruginosa PA01, an
opportunistic pathogen
JOURNAL Nature 406 (6799), 959-964 (2000)
PUBMED 10984043
REFERENCE 2 (bases 1 to 6264404)
AUTHORS Winsor,G.L., Lo,R., Sui,S.J., Ung,K.S., Huang,S., Cheng,D.,
Ching,W.K., Hancock,R.E. and Brinkman,F.S.
TITLE Pseudomonas aeruginosa Genome Database and PseudoCap: facilitating
community-based, continually updated, genome annotation
JOURNAL Nucleic Acids Res. 33 (DATABASE ISSUE), D338-D343 (2005)
PUBMED 15608211
REFERENCE 3 (bases 1 to 6264404)
AUTHORS Winsor,G.L., Van Rossum,T., Lo,R., Khaira,B., Whiteside,M.D.,
Hancock,R.E. and Brinkman,F.S.
TITLE Pseudomonas Genome Database: facilitating user-friendly,
comprehensive comparisons of microbial genomes
JOURNAL Nucleic Acids Res. 37 (DATABASE ISSUE), D483-D488 (2009)
PUBMED 18978025
REFERENCE 4 (bases 1 to 6264404)
AUTHORS Stover,C.K., Pham,X.-Q.T., Erwin,A.L., Mizoguchi,S.D., Warrener,P.,
Hickey,M.J., Brinkman,F.S.L., Hufnagle,W.O., Kowalik,D.J.,
Lagrou,M., Garber,R.L., Goltry,L., Tolentino,E.,
Westbrock-Wadman,S., Yuan,Y., Brody,L.L., Coulter,S.N.,
Folger,K.R., Kas,A., Larbig,K., Lim,R.M., Smith,K.A., Spencer,D.H.,
Wong,G.K.-S., Wu,Z., Paulsen,I.T., Reizer,J., Saier,M.H.,
Hancock,R.E.W., Lory,S. and Olson,M.V.
CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap)
TITLE Direct Submission
JOURNAL Submitted (16-MAY-2000) Department of Medicine and Genetics,
University of Washington Genome Center, University Of Washington,
Box 352145, Seattle, WA 98195, USA
REFERENCE 5 (bases 1 to 6264404)
AUTHORS Ung,K.S., Hancock,R.E. and Brinkman,F.S.
CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap)
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2003) Department of Molecular Biology and
Biochemistry, Simon Fraser University, 8888 University Dr.,
Burnaby, British Columbia V5A 1S6, Canada
REFERENCE 6 (bases 1 to 6264404)
AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S.
CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap)
TITLE Direct Submission
JOURNAL Submitted (05-JUL-2006) Department of Molecular Biology and
Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby,
British Columbia V5A 1S6, Canada
REMARK Sequence update by submitter
REFERENCE 7 (bases 1 to 6264404)
AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S.
CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap)
TITLE Direct Submission
JOURNAL Submitted (02-OCT-2008) Department of Molecular Biology and
Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby,
British Columbia V5A 1S6, Canada
REMARK Protein update by submitter
REFERENCE 8 (bases 1 to 6264404)
AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S.
CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap)
TITLE Direct Submission
JOURNAL Submitted (08-SEP-2010) Department of Molecular Biology and
Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby,
British Columbia V5A 1S6, Canada
REMARK Protein update by submitter
COMMENT On or before Jul 7, 2006 this sequence version replaced AE004440.1,
AE004441.1, AE004442.1, AE004443.1, AE004444.1, AE004445.1,
AE004446.1, AE004447.1, AE004448.1, AE004449.1, AE004450.1,
AE004451.1, AE004452.1, AE004453.1, AE004454.1, AE004455.1,
AE004456.1, AE004457.1, AE004458.1, AE004459.1, AE004460.1,
AE004461.1, AE004462.1, AE004463.1, AE004464.1, AE004465.1,
AE004466.1, AE004467.1, AE004468.1, AE004469.1, AE004470.1,
AE004471.1, AE004472.1, AE004473.1, AE004474.1, AE004475.1,
AE004476.1, AE004477.1, AE004478.1, AE004479.1, AE004480.1,
AE004481.1, AE004482.1, AE004483.1, AE004484.1, AE004485.1,
AE004486.1, AE004487.1, AE004488.1, AE004489.1, AE004490.1,
AE004491.1, AE004492.1, AE004493.1, AE004494.1, AE004495.1,
AE004496.1, AE004497.1, AE004498.1, AE004499.1, AE004500.1,
AE004501.1, AE004502.1, AE004503.1, AE004504.1, AE004505.1,
AE004506.1, AE004507.1, AE004508.1, AE004509.1, AE004510.1,
AE004511.1, AE004512.1, AE004513.1, AE004514.1, AE004515.1,
AE004516.1, AE004517.1, AE004518.1, AE004519.1, AE004520.1,
AE004521.1, AE004522.1, AE004523.1, AE004524.1, AE004525.1,
AE004526.1, AE004527.1, AE004528.1, AE004529.1, AE004530.1,
AE004531.1, AE004532.1, AE004533.1, AE004534.1, AE004535.1,
AE004536.1, AE004537.1, AE004538.1, AE004539.1, AE004540.1,
AE004541.1, AE004542.1, AE004543.1, AE004544.1, AE004545.1,
AE004546.1, AE004547.1, AE004548.1, AE004549.1, AE004550.1,
AE004551.1, AE004552.1, AE004553.1, AE004554.1, AE004555.1,
AE004556.1, AE004557.1, AE004558.1, AE004559.1, AE004560.1,
AE004561.1, AE004562.1, AE004563.1, AE004564.1, AE004565.1,
AE004566.1, AE004567.1, AE004568.1, AE004569.1, AE004570.1,
AE004571.1, AE004572.1, AE004573.1, AE004574.1, AE004575.1,
AE004576.1, AE004577.1, AE004578.1, AE004579.1, AE004580.1,
AE004581.1, AE004582.1, AE004583.1, AE004584.1, AE004585.1,
AE004586.1, AE004587.1, AE004588.1, AE004589.1, AE004590.1,
AE004591.1, AE004592.1, AE004593.1, AE004594.1, AE004595.1,
AE004596.1, AE004597.1, AE004598.1, AE004599.1, AE004600.1,
AE004601.1, AE004602.1, AE004603.1, AE004604.1, AE004605.1,
AE004606.1, AE004607.1, AE004608.1, AE004609.1, AE004610.1,
AE004611.1, AE004612.1, AE004613.1, AE004614.1, AE004615.1,
AE004616.1, AE004617.1, AE004618.1, AE004619.1, AE004620.1,
AE004621.1, AE004622.1, AE004623.1, AE004624.1, AE004625.1,
AE004626.1, AE004627.1, AE004628.1, AE004629.1, AE004630.1,
AE004631.1, AE004632.1, AE004633.1, AE004634.1, AE004635.1,
AE004636.1, AE004637.1, AE004638.1, AE004639.1, AE004640.1,
AE004641.1, AE004642.1, AE004643.1, AE004644.1, AE004645.1,
AE004646.1, AE004647.1, AE004648.1, AE004649.1, AE004650.1,
AE004651.1, AE004652.1, AE004653.1, AE004654.1, AE004655.1,
AE004656.1, AE004657.1, AE004658.1, AE004659.1, AE004660.1,
AE004661.1, AE004662.1, AE004663.1, AE004664.1, AE004665.1,
AE004666.1, AE004667.1, AE004668.1, AE004669.1, AE004670.1,
AE004671.1, AE004672.1, AE004673.1, AE004674.1, AE004675.1,
AE004676.1, AE004677.1, AE004678.1, AE004679.1, AE004680.1,
AE004681.1, AE004682.1, AE004683.1, AE004684.1, AE004685.1,
AE004686.1, AE004687.1, AE004688.1, AE004689.1, AE004690.1,
AE004691.1, AE004692.1, AE004693.1, AE004694.1, AE004695.1,
AE004696.1, AE004697.1, AE004698.1, AE004699.1, AE004700.1,
AE004701.1, AE004702.1, AE004703.1, AE004704.1, AE004705.1,
AE004706.1, AE004707.1, AE004708.1, AE004709.1, AE004710.1,
AE004711.1, AE004712.1, AE004713.1, AE004714.1, AE004715.1,
AE004716.1, AE004717.1, AE004718.1, AE004719.1, AE004720.1,
AE004721.1, AE004722.1, AE004723.1, AE004724.1, AE004725.1,
AE004726.1, AE004727.1, AE004728.1, AE004729.1, AE004730.1,
AE004731.1, AE004732.1, AE004733.1, AE004734.1, AE004735.1,
AE004736.1, AE004737.1, AE004738.1, AE004739.1, AE004740.1,
AE004741.1, AE004742.1, AE004743.1, AE004744.1, AE004745.1,
AE004746.1, AE004747.1, AE004748.1, AE004749.1, AE004750.1,
AE004751.1, AE004752.1, AE004753.1, AE004754.1, AE004755.1,
AE004756.1, AE004757.1, AE004758.1, AE004759.1, AE004760.1,
AE004761.1, AE004762.1, AE004763.1, AE004764.1, AE004765.1,
AE004766.1, AE004767.1, AE004768.1, AE004769.1, AE004770.1,
AE004771.1, AE004772.1, AE004773.1, AE004774.1, AE004775.1,
AE004776.1, AE004777.1, AE004778.1, AE004779.1, AE004780.1,
AE004781.1, AE004782.1, AE004783.1, AE004784.1, AE004785.1,
AE004786.1, AE004787.1, AE004788.1, AE004789.1, AE004790.1,
AE004791.1, AE004792.1, AE004793.1, AE004794.1, AE004795.1,
AE004796.1, AE004797.1, AE004798.1, AE004799.1, AE004800.1,
AE004801.1, AE004802.1, AE004803.1, AE004804.1, AE004805.1,
AE004806.1, AE004807.1, AE004808.1, AE004809.1, AE004810.1,
AE004811.1, AE004812.1, AE004813.1, AE004814.1, AE004815.1,
AE004816.1, AE004817.1, AE004818.1, AE004819.1, AE004820.1,
AE004821.1, AE004822.1, AE004823.1, AE004824.1, AE004825.1,
AE004826.1, AE004827.1, AE004828.1, AE004829.1, AE004830.1,
AE004831.1, AE004832.1, AE004833.1, AE004834.1, AE004835.1,
AE004836.1, AE004837.1, AE004838.1, AE004839.1, AE004840.1,
AE004841.1, AE004842.1, AE004843.1, AE004844.1, AE004845.1,
AE004846.1, AE004847.1, AE004848.1, AE004849.1, AE004850.1,
AE004851.1, AE004852.1, AE004853.1, AE004854.1, AE004855.1,
AE004856.1, AE004857.1, AE004858.1, AE004859.1, AE004860.1,
AE004861.1, AE004862.1, AE004863.1, AE004864.1, AE004865.1,
AE004866.1, AE004867.1, AE004868.1, AE004869.1, AE004870.1,
AE004871.1, AE004872.1, AE004873.1, AE004874.1, AE004875.1,
AE004876.1, AE004877.1, AE004878.1, AE004879.1, AE004880.1,
AE004881.1, AE004882.1, AE004883.1, AE004884.1, AE004885.1,
AE004886.1, AE004887.1, AE004888.1, AE004889.1, AE004890.1,
AE004891.1, AE004892.1, AE004893.1, AE004894.1, AE004895.1,
AE004896.1, AE004897.1, AE004898.1, AE004899.1, AE004900.1,
AE004901.1, AE004902.1, AE004903.1, AE004904.1, AE004905.1,
AE004906.1, AE004907.1, AE004908.1, AE004909.1, AE004910.1,
AE004911.1, AE004912.1, AE004913.1, AE004914.1, AE004915.1,
AE004916.1, AE004917.1, AE004918.1, AE004919.1, AE004920.1,
AE004921.1, AE004922.1, AE004923.1, AE004924.1, AE004925.1,
AE004926.1, AE004927.1, AE004928.1, AE004929.1, AE004930.1,
AE004931.1, AE004932.1, AE004933.1, AE004934.1, AE004935.1,
AE004936.1, AE004937.1, AE004938.1, AE004939.1, AE004940.1,
AE004941.1, AE004942.1, AE004943.1, AE004944.1, AE004945.1,
AE004946.1, AE004947.1, AE004948.1, AE004949.1, AE004950.1,
AE004951.1, AE004952.1, AE004953.1, AE004954.1, AE004955.1,
AE004956.1, AE004957.1, AE004958.1, AE004959.1, AE004960.1,
AE004961.1, AE004962.1, AE004963.1, AE004964.1, AE004965.1,
AE004966.1, AE004967.1, AE004968.1, AE004091.1.
-----------------------------------------------------------------
This represents the Sept 08, 2010 version of the continually
updated, reviewed, Pseudomonas aeruginosa PAO1 genome annotation
from PseudoCap (see http://www.pseudomonas.com for the latest
updates and links to alternate annotations). This update includes
updated base pair coordinates and new features. PseudoCap is
coordinated by Fiona S.L. Brinkman (Simon Fraser University,
Canada) and Robert E.W. Hancock (University of British Columbia,
Canada) with database development by Geoff Winsor (Simon Fraser
University). We welcome submission through
www.pseudomonas.com of any proposed changes.
'Protein name confidence' is used to rate our confidence of the
accuracy of the protein name.
Class 1: Function experimentally demonstrated in P. aeruginosa.
Class 2: Function of highly similar gene experimentally
demonstrated in another organism (and gene context consistent in
terms of pathways its involved in, if known).
Class 3: Function proposed based on presence of conserved amino
acid motif, structural feature or limited sequence similarity to an
experimentally studied gene.
Class 4: Homologs of previously reported genes of unknown function,
or no similarity to any previously reported sequences.
------------------------------------------------------------------.
FEATURES Qualifiers
source /organism="Pseudomonas aeruginosa PAO1"
/mol_type="genomic DNA"
/strain="PAO1"
/db_xref="taxon:208964"
protein /gene="thiC"
/locus_tag="PA4973"
/note="Product name confidence: Class 2 (High similarity
to functionally studied protein)"
/transl_table=11
BEGIN
1 MSATQKNNIT RLEQLDRQST QPFPNSRKVY LTGSRPDIRV PVREISLADT PTAFGGEKNP
61 PVFVYDTSGP YTDPEVRIDL RKGLPDVRSR WIDERGDTEI LPGLTSEFGQ ARLADASLDA
121 LRFAHVRTPR RAKPGANVSQ MHYAKKGIIT PEMEYIAIRE NMKLQEARAA GLLDQQHPGH
181 SFGANIPKEI TPEFVREEVA RGRAIIPANI NHTELEPMII GRNFLVKING NIGNSALGSS
241 IEEEVEKLTW GIRWGADTVM DLSTGKHIHE TREWILRNSP VPIGTVPIYQ ALEKVNGVAE
301 DLTWEIFRDT LIEQAEQGVD YFTIHAGVLL RYVPLTAKRV TGIVSRGGSI MAKWCLAHHQ
361 ENFLYTHFEE ICEIMKAYDV SFSLGDGLRP GSVADANDAA QFGELETLGE LTKIAWKHDV
421 QVMIEGPGHV PMQLIKENMD KQLECCDEAP FYTLGPLTTD IAPGYDHITS GIGAAMIGWF
481 GCAMLCYVTP KEHLGLPNKD DVKTGIITYK IAAHAADLAK GHPGAQIRDN ALSKARFEFR
541 WEDQFNLGLD PDTARAFHDE TLPKDSAKVA HFCSMCGPKF CSMKITQEVR DYAKENGLSD
601 ESKAIEAGFQ EQAARFKDEG SVIYRQV
//