LOCUS AAG05787.1 2448 aa PRT BCT 31-JAN-2014 DEFINITION Pseudomonas aeruginosa PAO1 pyoverdine synthetase D protein. ACCESSION AE004091-2403 PROTEIN_ID AAG05787.1 SOURCE Pseudomonas aeruginosa PAO1 ORGANISM Pseudomonas aeruginosa PAO1 Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6264404) AUTHORS Stover,C.K., Pham,X.Q., Erwin,A.L., Mizoguchi,S.D., Warrener,P., Hickey,M.J., Brinkman,F.S., Hufnagle,W.O., Kowalik,D.J., Lagrou,M., Garber,R.L., Goltry,L., Tolentino,E., Westbrock-Wadman,S., Yuan,Y., Brody,L.L., Coulter,S.N., Folger,K.R., Kas,A., Larbig,K., Lim,R., Smith,K., Spencer,D., Wong,G.K., Wu,Z., Paulsen,I.T., Reizer,J., Saier,M.H., Hancock,R.E., Lory,S. and Olson,M.V. TITLE Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen JOURNAL Nature 406 (6799), 959-964 (2000) PUBMED 10984043 REFERENCE 2 (bases 1 to 6264404) AUTHORS Winsor,G.L., Lo,R., Sui,S.J., Ung,K.S., Huang,S., Cheng,D., Ching,W.K., Hancock,R.E. and Brinkman,F.S. TITLE Pseudomonas aeruginosa Genome Database and PseudoCap: facilitating community-based, continually updated, genome annotation JOURNAL Nucleic Acids Res. 33 (DATABASE ISSUE), D338-D343 (2005) PUBMED 15608211 REFERENCE 3 (bases 1 to 6264404) AUTHORS Winsor,G.L., Van Rossum,T., Lo,R., Khaira,B., Whiteside,M.D., Hancock,R.E. and Brinkman,F.S. TITLE Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes JOURNAL Nucleic Acids Res. 37 (DATABASE ISSUE), D483-D488 (2009) PUBMED 18978025 REFERENCE 4 (bases 1 to 6264404) AUTHORS Stover,C.K., Pham,X.-Q.T., Erwin,A.L., Mizoguchi,S.D., Warrener,P., Hickey,M.J., Brinkman,F.S.L., Hufnagle,W.O., Kowalik,D.J., Lagrou,M., Garber,R.L., Goltry,L., Tolentino,E., Westbrock-Wadman,S., Yuan,Y., Brody,L.L., Coulter,S.N., Folger,K.R., Kas,A., Larbig,K., Lim,R.M., Smith,K.A., Spencer,D.H., Wong,G.K.-S., Wu,Z., Paulsen,I.T., Reizer,J., Saier,M.H., Hancock,R.E.W., Lory,S. and Olson,M.V. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (16-MAY-2000) Department of Medicine and Genetics, University of Washington Genome Center, University Of Washington, Box 352145, Seattle, WA 98195, USA REFERENCE 5 (bases 1 to 6264404) AUTHORS Ung,K.S., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (04-FEB-2003) Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REFERENCE 6 (bases 1 to 6264404) AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (05-JUL-2006) Department of Molecular Biology and Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REMARK Sequence update by submitter REFERENCE 7 (bases 1 to 6264404) AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (02-OCT-2008) Department of Molecular Biology and Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REMARK Protein update by submitter REFERENCE 8 (bases 1 to 6264404) AUTHORS Winsor,G.L., Hancock,R.E. and Brinkman,F.S. CONSRTM Pseudomonas aeruginosa Community Annotation Project (PseudoCap) TITLE Direct Submission JOURNAL Submitted (08-SEP-2010) Department of Molecular Biology and Biochemisry, Simon Fraser University, 8888 University Dr., Burnaby, British Columbia V5A 1S6, Canada REMARK Protein update by submitter COMMENT On or before Jul 7, 2006 this sequence version replaced AE004440.1, AE004441.1, AE004442.1, AE004443.1, AE004444.1, AE004445.1, AE004446.1, AE004447.1, AE004448.1, AE004449.1, AE004450.1, AE004451.1, AE004452.1, AE004453.1, AE004454.1, AE004455.1, AE004456.1, AE004457.1, AE004458.1, AE004459.1, AE004460.1, AE004461.1, AE004462.1, AE004463.1, AE004464.1, AE004465.1, AE004466.1, AE004467.1, AE004468.1, AE004469.1, AE004470.1, AE004471.1, AE004472.1, AE004473.1, AE004474.1, AE004475.1, AE004476.1, AE004477.1, AE004478.1, AE004479.1, AE004480.1, AE004481.1, AE004482.1, AE004483.1, AE004484.1, AE004485.1, AE004486.1, AE004487.1, AE004488.1, AE004489.1, AE004490.1, AE004491.1, AE004492.1, AE004493.1, AE004494.1, AE004495.1, AE004496.1, AE004497.1, AE004498.1, AE004499.1, AE004500.1, AE004501.1, AE004502.1, AE004503.1, AE004504.1, AE004505.1, AE004506.1, AE004507.1, AE004508.1, AE004509.1, AE004510.1, AE004511.1, AE004512.1, AE004513.1, AE004514.1, AE004515.1, AE004516.1, AE004517.1, AE004518.1, AE004519.1, AE004520.1, AE004521.1, AE004522.1, AE004523.1, AE004524.1, AE004525.1, AE004526.1, AE004527.1, AE004528.1, AE004529.1, AE004530.1, AE004531.1, AE004532.1, AE004533.1, AE004534.1, AE004535.1, AE004536.1, AE004537.1, AE004538.1, AE004539.1, AE004540.1, AE004541.1, AE004542.1, AE004543.1, AE004544.1, AE004545.1, AE004546.1, AE004547.1, AE004548.1, AE004549.1, AE004550.1, AE004551.1, AE004552.1, AE004553.1, AE004554.1, AE004555.1, AE004556.1, AE004557.1, AE004558.1, AE004559.1, AE004560.1, AE004561.1, AE004562.1, AE004563.1, AE004564.1, AE004565.1, AE004566.1, AE004567.1, AE004568.1, AE004569.1, AE004570.1, AE004571.1, AE004572.1, AE004573.1, AE004574.1, AE004575.1, AE004576.1, AE004577.1, AE004578.1, AE004579.1, AE004580.1, AE004581.1, AE004582.1, AE004583.1, AE004584.1, AE004585.1, AE004586.1, AE004587.1, AE004588.1, AE004589.1, AE004590.1, AE004591.1, AE004592.1, AE004593.1, AE004594.1, AE004595.1, AE004596.1, AE004597.1, AE004598.1, AE004599.1, AE004600.1, AE004601.1, AE004602.1, AE004603.1, AE004604.1, AE004605.1, AE004606.1, AE004607.1, AE004608.1, AE004609.1, AE004610.1, AE004611.1, AE004612.1, AE004613.1, AE004614.1, AE004615.1, AE004616.1, AE004617.1, AE004618.1, AE004619.1, AE004620.1, AE004621.1, AE004622.1, AE004623.1, AE004624.1, AE004625.1, AE004626.1, AE004627.1, AE004628.1, AE004629.1, AE004630.1, AE004631.1, AE004632.1, AE004633.1, AE004634.1, AE004635.1, AE004636.1, AE004637.1, AE004638.1, AE004639.1, AE004640.1, AE004641.1, AE004642.1, AE004643.1, AE004644.1, AE004645.1, AE004646.1, AE004647.1, AE004648.1, AE004649.1, AE004650.1, AE004651.1, AE004652.1, AE004653.1, AE004654.1, AE004655.1, AE004656.1, AE004657.1, AE004658.1, AE004659.1, AE004660.1, AE004661.1, AE004662.1, AE004663.1, AE004664.1, AE004665.1, AE004666.1, AE004667.1, AE004668.1, AE004669.1, AE004670.1, AE004671.1, AE004672.1, AE004673.1, AE004674.1, AE004675.1, AE004676.1, AE004677.1, AE004678.1, AE004679.1, AE004680.1, AE004681.1, AE004682.1, AE004683.1, AE004684.1, AE004685.1, AE004686.1, AE004687.1, AE004688.1, AE004689.1, AE004690.1, AE004691.1, AE004692.1, AE004693.1, AE004694.1, AE004695.1, AE004696.1, AE004697.1, AE004698.1, AE004699.1, AE004700.1, AE004701.1, AE004702.1, AE004703.1, AE004704.1, AE004705.1, AE004706.1, AE004707.1, AE004708.1, AE004709.1, AE004710.1, AE004711.1, AE004712.1, AE004713.1, AE004714.1, AE004715.1, AE004716.1, AE004717.1, AE004718.1, AE004719.1, AE004720.1, AE004721.1, AE004722.1, AE004723.1, AE004724.1, AE004725.1, AE004726.1, AE004727.1, AE004728.1, AE004729.1, AE004730.1, AE004731.1, AE004732.1, AE004733.1, AE004734.1, AE004735.1, AE004736.1, AE004737.1, AE004738.1, AE004739.1, AE004740.1, AE004741.1, AE004742.1, AE004743.1, AE004744.1, AE004745.1, AE004746.1, AE004747.1, AE004748.1, AE004749.1, AE004750.1, AE004751.1, AE004752.1, AE004753.1, AE004754.1, AE004755.1, AE004756.1, AE004757.1, AE004758.1, AE004759.1, AE004760.1, AE004761.1, AE004762.1, AE004763.1, AE004764.1, AE004765.1, AE004766.1, AE004767.1, AE004768.1, AE004769.1, AE004770.1, AE004771.1, AE004772.1, AE004773.1, AE004774.1, AE004775.1, AE004776.1, AE004777.1, AE004778.1, AE004779.1, AE004780.1, AE004781.1, AE004782.1, AE004783.1, AE004784.1, AE004785.1, AE004786.1, AE004787.1, AE004788.1, AE004789.1, AE004790.1, AE004791.1, AE004792.1, AE004793.1, AE004794.1, AE004795.1, AE004796.1, AE004797.1, AE004798.1, AE004799.1, AE004800.1, AE004801.1, AE004802.1, AE004803.1, AE004804.1, AE004805.1, AE004806.1, AE004807.1, AE004808.1, AE004809.1, AE004810.1, AE004811.1, AE004812.1, AE004813.1, AE004814.1, AE004815.1, AE004816.1, AE004817.1, AE004818.1, AE004819.1, AE004820.1, AE004821.1, AE004822.1, AE004823.1, AE004824.1, AE004825.1, AE004826.1, AE004827.1, AE004828.1, AE004829.1, AE004830.1, AE004831.1, AE004832.1, AE004833.1, AE004834.1, AE004835.1, AE004836.1, AE004837.1, AE004838.1, AE004839.1, AE004840.1, AE004841.1, AE004842.1, AE004843.1, AE004844.1, AE004845.1, AE004846.1, AE004847.1, AE004848.1, AE004849.1, AE004850.1, AE004851.1, AE004852.1, AE004853.1, AE004854.1, AE004855.1, AE004856.1, AE004857.1, AE004858.1, AE004859.1, AE004860.1, AE004861.1, AE004862.1, AE004863.1, AE004864.1, AE004865.1, AE004866.1, AE004867.1, AE004868.1, AE004869.1, AE004870.1, AE004871.1, AE004872.1, AE004873.1, AE004874.1, AE004875.1, AE004876.1, AE004877.1, AE004878.1, AE004879.1, AE004880.1, AE004881.1, AE004882.1, AE004883.1, AE004884.1, AE004885.1, AE004886.1, AE004887.1, AE004888.1, AE004889.1, AE004890.1, AE004891.1, AE004892.1, AE004893.1, AE004894.1, AE004895.1, AE004896.1, AE004897.1, AE004898.1, AE004899.1, AE004900.1, AE004901.1, AE004902.1, AE004903.1, AE004904.1, AE004905.1, AE004906.1, AE004907.1, AE004908.1, AE004909.1, AE004910.1, AE004911.1, AE004912.1, AE004913.1, AE004914.1, AE004915.1, AE004916.1, AE004917.1, AE004918.1, AE004919.1, AE004920.1, AE004921.1, AE004922.1, AE004923.1, AE004924.1, AE004925.1, AE004926.1, AE004927.1, AE004928.1, AE004929.1, AE004930.1, AE004931.1, AE004932.1, AE004933.1, AE004934.1, AE004935.1, AE004936.1, AE004937.1, AE004938.1, AE004939.1, AE004940.1, AE004941.1, AE004942.1, AE004943.1, AE004944.1, AE004945.1, AE004946.1, AE004947.1, AE004948.1, AE004949.1, AE004950.1, AE004951.1, AE004952.1, AE004953.1, AE004954.1, AE004955.1, AE004956.1, AE004957.1, AE004958.1, AE004959.1, AE004960.1, AE004961.1, AE004962.1, AE004963.1, AE004964.1, AE004965.1, AE004966.1, AE004967.1, AE004968.1, AE004091.1. ----------------------------------------------------------------- This represents the Sept 08, 2010 version of the continually updated, reviewed, Pseudomonas aeruginosa PAO1 genome annotation from PseudoCap (see http://www.pseudomonas.com for the latest updates and links to alternate annotations). This update includes updated base pair coordinates and new features. PseudoCap is coordinated by Fiona S.L. Brinkman (Simon Fraser University, Canada) and Robert E.W. Hancock (University of British Columbia, Canada) with database development by Geoff Winsor (Simon Fraser University). We welcome submission through www.pseudomonas.com of any proposed changes. 'Protein name confidence' is used to rate our confidence of the accuracy of the protein name. Class 1: Function experimentally demonstrated in P. aeruginosa. Class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in, if known). Class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene. Class 4: Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences. ------------------------------------------------------------------. FEATURES Qualifiers source /organism="Pseudomonas aeruginosa PAO1" /mol_type="genomic DNA" /strain="PAO1" /db_xref="taxon:208964" protein /gene="pvdD" /locus_tag="PA2399" /note="Product name confidence: Class 1 (Function experimentally demonstrated in P. aeruginosa)" /transl_table=11 BEGIN 1 MQALIEKVGS LSPQERKALA VLLKQQGVNL FEIAPVFKRQ DGEPLRLSYA QERQWFLWQL 61 EPESAAYHIP SVLRLRGRLD LDALQRSFDS LVARHETLRT RFRLDGDEAR QEIAASMALP 121 LDIVALGPLE EGALARQVET TIARPFDLER GPLLRVSLLR LAEDDHVLVL VQHHIVSDGW 181 SMQVMVEELV QLYAAYSRGL EVALPALPIQ YADYALWQRS WMEAGEKERQ LAYWTGLLGG 241 EQPVLELPFD RPRPVRQSHR GAQFILELDI DLSQALRRVA QQEGATAFAL LLASFQALLY 301 RYSGQADIRV GVPIANRNRV ETERLIGFFV NTQVLKADLD GRMGFDELLA QARQRALEAQ 361 AHQDLPFEQL VEALQPERSL SHNPLFQVLF NYQSEARGNG QAFRFDELQM ESVQFDSRTA 421 QFDLTLDLTD EEQRFCAVFD YATDLFDAST VERLAGHWRN LLRGIVANPR QRLGELPLLD 481 APERRQTLSE WNPAQRECAV QGTLQQRFEE QARQRPQAVA LILDEQRLSY GELNARANRL 541 AHCLIARGVG ADVPVGLALE RSLDMLVGLL AILKAGGAYL PLDPAAPEER LAHILDDSGV 601 RLLLTQGHLL ERLPRQAGVE VLAIDGLVLD GYAESDPLPT LSADNLAYVI YTSGSTGKPK 661 GTLLTHRNAL RLFSATEAWF GFDERDVWTL FHSYAFDFSV WEIFGALLYG GCLVIVPQWV 721 SRSPEDFYRL LCREGVTVLN QTPSAFKQLM AVACSADMAT QQPALRYVIF GGEALDLQSL 781 RPWFQRFGDR QPQLVNMYGI TETTVHVTYR PVSEADLEGG LVSPIGGTIP DLSWYILDRD 841 LNPVPRGAVG ELYIGRAGLA RGYLRRPGLS ATRFVPNPFP GGAGERLYRT GDLARFQADG 901 NIEYIGRIDH QVKVRGFRIE LGEIEAALAG LAGVRDAVVL AHDGVGGTQL VGYVVADSAE 961 DAERLRESLR ESLKRHLPDY MVPAHLMLLE RMPLTVNGKL DRQALPQPDA SLSQQAYRAP 1021 GSELEQRIAA IWSEILGVER VGLDDNFFEL GGHSLLATRV ISRVRQEQQL DASLKALFER 1081 PVLEAFAQGL ERTTDAVSTI PLADRQQPLA LSFAQERQWF LWQLEPESAA YHIPSALRLR 1141 GRLDVDALQR SFDSLVARHE TLRTRFRLEG GRSYQQVQPA VSVSIEREQF GEEGLIERIQ 1201 AIVVQPFDLE RGPLLRVNLL QLAEDDHVLV LVQHHIVSDG WSMQVMVEEL VQLYAAYSQG 1261 LDVVLPALPI QYADYALWQR SWMEAGEKER QLAYWTGLLG GEQPVLELPF DRPRPARQSH 1321 RGAQLGFELS RELVEAVRAL AQREGASSFM LLLASFQALL YRYSGQADIR VGVPIANRNR 1381 VETERLIGFF VNTQVLKADL DGRMGFDELL AQARQRALEA QAHQDLPFEQ LVEALQPERN 1441 ASHNPLFQVL FNHQSEIRSV TPEVQLEDLR LEGLAWDGQT AQFDLTLDIQ EDENGIWASF 1501 DYATDLFDAS TVERLAGHWR NLLRGIVANP RQRLGELPLL DAPERRQTLS EWNPAQRECA 1561 VQGTLQQRFE EQARQRPQAV ALILDEQRLS YGELNARANR LAHCLIARGV GADVPVGLAL 1621 ERSLDMLVGL LAILKAGGAY LPLDPAAPEE RLAHILDDSG VRLLLTQGHL LERLPRQAGV 1681 EVLAIDGLVL DGYAESDPLP TLSADNLAYV IYTSGSTGKP KGTLLTHRNA LRLFSATEAW 1741 FGFDERDVWT LFHSYAFDFS VWEIFGALLY GGRLVIVPQW VSRSPEDFYR LLCREGVTVL 1801 NQTPSAFKQL MAVACSADMA TQQPALRYVI FGGEALDLQS LRPWFQRFGD RQPQLVNMYG 1861 ITETTVHVTY RPVSEADLKG GLVSPIGGTI PDLSWYILDR DLNPVPRGAV GELYIGRAGL 1921 ARGYLRRPGL SATRFVPNPF PGGAGERLYR TGDLARFQAD GNIEYIGRID HQVKVRGFRI 1981 ELGEIEAALA GLAGVRDAVV LAHDGVGGTQ LVGYVVADSA EDAERLRESL RESLKRHLPD 2041 YMVPAHLMLL ERMPLTVNGK LDRQALPQPD ASLSQQAYRA PGSELEQRIA AIWAEILGVE 2101 RVGLDDNFFE LGGHSLLLLM LKERIGDTCQ ATLSISQLMT HASVAEQAAC IEGQARESLL 2161 VPLNGRREGS PLFMFHPSFG SVHCYKTLAM ALRDRHPVKG VVCRALLGAG REVPEWDDMV 2221 AEYAEQLLQE HPEGVFNLAG WSLGGNLAMD VAARLEQRGR QVAFVGWIDA PAPVRVEAFW 2281 NEIGPTPEAV PNLSVGEMRV ELLGVMFPER AEHIERAWSS ICSATTDDEQ RWTRMSDWAE 2341 AEIGAEFATL RSEIAQSNEL EVSWELKQIL DERLKAMDYP RLTAKVSLWW AARSTNAIQR 2401 SAVERSMAEA IGAERVEPVR VLDTRHDKII DHPEFVQSFR AALERAGR //