LOCUS AAF80120.1 1628 aa PRT PLN 29-JUN-2000
DEFINITION Arabidopsis thaliana T21E18.2 protein.
ACCESSION AC024174-2
PROTEIN_ID AAF80120.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 74316)
AUTHORS Sakano,H., Vaysberg,M., Lee,J., Lenz,C., Liu,S.X., Pham,P.,
Toriumi,M., Yu,G., Chin,C., Chiou,J., Choi,E., Chung,M.,
Gonzalez,A., Howng,B., Liu,A., Altafi,H., Brooks,S., Buehler,E.,
Chao,Q., Conn,L., Conway,A.B., Hansen,N.F., Johnson-Hopson,C.,
Khan,S., Kim,C., Lam,B., Miranda,M., Nguyen,M., Palm,C.J.,
Shinn,P., Southwick,A., Davis,R.W., Ecker,J.R., Federspiel,N.A. and
Theologis,A.
TITLE The sequence of BAC T21E18 from Arabidopsis thaliana chromosome 1
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 74316)
AUTHORS Theologis,A.
TITLE Direct Submission
JOURNAL Submitted (25-FEB-2000) Plant Gene Expression Center, 800 Buchanan
Street, Albany, CA 94710, USA
REFERENCE 3 (bases 1 to 74316)
AUTHORS Theologis,A.
TITLE Direct Submission
JOURNAL Submitted (15-MAR-2000) Plant Gene Expression Center, 800 Buchanan
Street, Albany, CA 94710, USA
REFERENCE 4 (bases 1 to 74316)
AUTHORS Theologis,A.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2000) Plant Gene Expression Center, 800 Buchanan
St., Albany, CA 94710, USA
COMMENT On Mar 15, 2000 this sequence version replaced AC024174.1.
The sequence is of BAC T21E18 from Arabidopsis thaliana chromosome
1. The sequence does not represent the sequence of the entire
insert of this clone because BAC T21E18 contains an E.coli
insertion element 10 (IS10) at position 101153. The IS10 (1329 bp
in size) and the target site duplication (TGCATGGTC) have been
removed from this entry. The correct Arabidopsis sequence is
confirmed by sequencing the PCR product from genomic DNA. The
sequence is also shorter by 30500 bp because we submit only the
unique sequence of the clone. However, in order to facilitate the
joining of overlapping clones in the future, for creation of larger
contigs, we provide small overlaps (200 bp) between overlapping
sumbitted clones. The 5' end of this sequence overlaps by 200 bp
to the 3' end of the sequence of the clone T20M3.
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="1"
/clone="T21E18"
/ecotype="Columbia"
protein /gene="T21E18.2"
/inference="non-experimental evidence, no additional
details recorded"
/note="Contains similarity to an unknown protein T11A7.7
gi|2335096 from Arabidopsis thaliana BAC T11A7 gb|AC002339
and contains a tropomyosin PF|00261 domain. ESTs
gb|AI995205, gb|N37925, gb|F13889, gb|AV523107,
gb|AV535948, gb|AV558461, gb|F13888 come from this gene."
intron_pos 46:0 (1/30)
intron_pos 71:0 (2/30)
intron_pos 109:2 (3/30)
intron_pos 148:0 (4/30)
intron_pos 191:0 (5/30)
intron_pos 207:0 (6/30)
intron_pos 258:2 (7/30)
intron_pos 324:1 (8/30)
intron_pos 421:0 (9/30)
intron_pos 471:0 (10/30)
intron_pos 589:0 (11/30)
intron_pos 639:0 (12/30)
intron_pos 664:1 (13/30)
intron_pos 714:0 (14/30)
intron_pos 779:0 (15/30)
intron_pos 826:0 (16/30)
intron_pos 871:0 (17/30)
intron_pos 938:0 (18/30)
intron_pos 988:2 (19/30)
intron_pos 1004:0 (20/30)
intron_pos 1057:0 (21/30)
intron_pos 1202:1 (22/30)
intron_pos 1251:2 (23/30)
intron_pos 1288:2 (24/30)
intron_pos 1340:0 (25/30)
intron_pos 1411:0 (26/30)
intron_pos 1483:0 (27/30)
intron_pos 1505:1 (28/30)
intron_pos 1557:0 (29/30)
intron_pos 1579:1 (30/30)
BEGIN
1 MGVMSRRVLP ACGNLCFFCP SLRARSRHPV KRYKKMLAEI FPRNQEAEPN DRKIGKLCEY
61 ASRNPLRIPK ITEYLEQKCY KELRNGNIGS VKVVLCIYKK LLSSCKEQMP LFSCSLLSIV
121 RTLLEQTKEE EVQILGCNTL VDFISLQTVN SHMFNLEGLI PKLCQLAQEM GDDERSLQLR
181 SAGMQALAFM VSFIGEHSQL SMDLDMIISV ILENYMDLEK GQEDTKEVDQ ISDTKIPNMT
241 KKVSFKPNPV TDYKLENMDI SKSPSYWSMV CLCNIAKLAK ETTTVRRVLE PLLTAFDSGD
301 YWSPQKGVAS SVLLFLQSRL EESGENCHVL VSSLIKHLDH KNVIKQQGLQ INMVNVATCL
361 ALHAKQQASG AMTAVIADLI KHLRKCLQNA AESDVSVDKT KQNSDLQHAL ENCIAELSNK
421 VGDAGPILDM FAVVLETIST NVVLSRTTAS AILRAAHIVS VVPNVSYHKK VFPDALFHQL
481 LLAMSHADCT TRVEAHNIFS VVLLGTLRLP WSDQHKETSE AVSGSLSVDG ICTVRNQEEE
541 KEKVEKSLNS ELCKDVNHIS RPSVSGQTSQ QLSCQSLDSL KDLDDGIKSL CSLRLSSHQV
601 NMLLSSLWIQ ATSTDNTPEN FEAMASTYQI TLLFSLAKRS NHMALVQCFQ LAFSLRNLSL
661 NQDDFWYNVE GGMQHSRRRS IFTFASYMLI FGAKISNILE LVPIIKESLT AQMVDPYLVL
721 EGDIRLRAVC SGFPQEETYG SDKDDSAALN SSVIVTDDRR LKEIVITHFT SKLQTLSEEE
781 QLNLRKEIQS DFSLDDAHSL GGQLFTDTPG PSSPLNQTEL PAFEEVELSD IAAFEGISPG
841 ASGSQSGHRT SLSTNTNPVD VLSVNELLES VSETARQVAS LPVSSIPVPY DQMMNQCEAL
901 VTGKQQKMSV LRSFKPQATK AITSEDNEKD EQYLLKETEE AGEDDEKAII VADVQPQGQL
961 GFFSQEVPQN SFRLPPSSPY DKFLKAAGVK NCGRVWSVNV LCLEVDCSLP VTKTTDSCPT
1021 EDAIRALLES LVDPLLPSKP TDDLPSTSIR ESVAKQVHAV VLLYNYYHRK DNPHLECLSF
1081 ESFRSLATVM KPALLQHLKE DGGVSGQTVL LEKVIVDACS LSMSLDASSD LFILNKCPIR
1141 RVAVLLVDSE KKSCYLQHSS ITQGVWSLLE KPIEKEKAAR ENQKEEGVFQ KVAFAVVKEA
1201 TGVNHKDIVI LERHLVCSLS EEKTAVRFYI MKCTSQDKFS GENPVEEVLS CMQGPLFEKS
1261 FSDWTMNSIV EYFHVLPYAT LIEDWFSRRG DTEFVIEKEP EAVCDDIESN KVDATKESEV
1321 SDIFERREKA ALKRRYEIKA KKVAALLSHP GARGKATTRL QNRYLKGSMS GAKEPNVHSE
1381 TVVALKAKNV GNEMSPCKDN YSNGEKGGFE VASDPKELKE RGLQRKKAVP DRLNSIHKLN
1441 STPASAHNSN PNLEELQTSL LSKATSLSET ALKVLLCKRD KLTRQQRNIE DEIAKCDKCI
1501 QNIKGDWELQ LETVLECCNE TYPRRNLQES LDKSACQSNK RLKLSETLPS TKSLCQRLDD
1561 ICLMNNWVLP NYRVAPSDGG YEAEVRITGN HVACTIHGEE KSDAEEARES AAACLLTKLQ
1621 HDTAANLS
//