LOCUS       UJP39294.1               454 aa    PRT              BCT 25-JAN-2022
DEFINITION  Cellulomonas palmilytica cystathionine beta-synthase protein.
ACCESSION   CP062221-2602
PROTEIN_ID  UJP39294.1
SOURCE      Cellulomonas palmilytica
  ORGANISM  Cellulomonas palmilytica
            Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae;
            Cellulomonas.
REFERENCE   1  (bases 1 to 3834012)
  AUTHORS   Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R.,
            Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C.
  TITLE     Cellulomonas coenopalmateriei, sp. nov., a novel species of genus
            Cellulomonas for degradation of raw lignocellulose biomass; oil
            palm empty fruit bunch
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3834012)
  AUTHORS   Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R.,
            Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-SEP-2020) Pilot Plant Development and Training
            Institute, King Mongkut's University of Technology Thonburi,
            Bangkuntien-Chaitalay, Bangkok 10150, Thailand
COMMENT     Bacteria and source DNA available from Enzyme Technology
            Laboratory, Pilot Plant Development and Training Institute, King
            Mongkut's University of Technology Thonburi.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAY-2020
            Assembly Method        :: unicycler v. v0.4.8
            Assembly Name          :: EW123_hybrid
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/30/2020 19:03:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.13
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,454
            CDSs (total)                      :: 3,400
            Genes (coding)                    :: 3,351
            CDSs (with protein)               :: 3,351
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 8 of 49
            Pseudo Genes (incomplete)         :: 41 of 49
            Pseudo Genes (internal stop)      :: 2 of 49
            Pseudo Genes (multiple problems)  :: 2 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Cellulomonas palmilytica"
                     /mol_type="genomic DNA"
                     /strain="EW123"
                     /isolation_source="Earthworm bio-fertilizer soil"
                     /type_material="type strain of Cellulomonas palmilytica"
                     /db_xref="taxon:2608402"
                     /country="Thailand: Bangkok"
                     /lat_lon="13.6771 N 100.4591 E"
                     /collection_date="Nov-2015"
                     /collected_by="Enzyme Technology Laboratory, KMUTT"
     protein         /locus_tag="F1D97_13230"
                     /EC_number="4.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013883401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MKYANRITDL VGGTPLVRLH AVTEGIDALV LAKVEYLNPG GSSKDRIAAR IIDAAERDGL
       61 LKPGGTIVEP TSGNTGVGLA LVAQQRGYRC VFVVPDKVGE DKRAVLAAYG AEVVVTPTSV
      121 APDDPRSYYS VSDRLAAEIP GAFKPNQYEN PNGPRSHYET TGPEIWQDTD GRVTHFVAGI
      181 GTGGTISGTG RYLKEVSDGA VRVVGADPVG SVYSGGTGRP YLVEGVGEDI WPGAYDPTVV
      241 DDVIAIRDAE SFELTRRLAR EEGLLVGGSS GMAVAAALRV ARGLGADDVV VVLLPDGGRG
      301 YLGKIFDDAW LRSYGFSDLP AERTVRDVVT AKDGSLPALV HAHPVDTVRD AIAMMTEFGV
      361 SQLPVLTAEP PVVIGEVVGA VDEESLLEKV FSGEVEMGDP VSAVLQEGLP QIGVNESVEQ
      421 ARKALGTAGA LLVVDEGAPV SVLTRADLLT FLSH
//