LOCUS       SPS41589.1               742 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Prion-like-(Q/N-rich)-domain-bearing
            protein protein.
ACCESSION   BX284606-3680
PROTEIN_ID  SPS41589.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="pqn-36"
                     /locus_tag="CELE_F39D8.1"
                     /standard_name="F39D8.1d"
                     /note="Confirmed by transcript evidence"
                     /db_xref="UniProtKB/TrEMBL:A0A2X0RCY9"
                     /db_xref="WormBase:WBGene00004123"
     intron_pos      11:0 (1/11)
     intron_pos      30:2 (2/11)
     intron_pos      66:1 (3/11)
     intron_pos      87:0 (4/11)
     intron_pos      340:1 (5/11)
     intron_pos      490:1 (6/11)
     intron_pos      511:1 (7/11)
     intron_pos      542:0 (8/11)
     intron_pos      682:0 (9/11)
     intron_pos      704:1 (10/11)
     intron_pos      725:1 (11/11)
BEGIN
        1 MKLFAFLLVL YVSPGCLSQC VNCAPQPIYQ SPCCVPTSNV QTIQSARAFT NGAQGSQVIM
       61 YYNGQRVVAN SQDPQQQQQA GSNFNQAPNY QNPGPIPGYQ TGYDQNQNQT QSGGYYPNNL
      121 NGGVVAGGAT TGTVVIGGVT QQVTQGGQPN VGGNVGGQNQ NVGGVVGDQN QNQYQNQNIN
      181 AAGVVGNQNQ FQNQNQNINA GGYVGDQNQN QFQDPNQGQY QNQNQNINTG GYIGDQSQNQ
      241 NQGQYPDPNQ GQYQNQNQQN QNINAGGYVD QNQFQGQDQN INAGGYVGNQ NQNPGQFQDQ
      301 NQNNYQGQYQ GSTLAPSAGE VDYQPFTPSG NTDYNNNAQG FDQQQGQQGQ YQQNQNDQQV
      361 IYPSGGVVAG GAVTGGSYNS PNSGYVQAQP QTYPTQVVTG GAVPNQNVQQ QPDVNTQYQD
      421 QNVQQNQQNQ QNMGQQGNFQ GNQQGGFVGS TTPQQGQHFT TSPQGQYQQP STQYTNQQGM
      481 YSSTPGYQQG GQQQFTTSPN GQQGFNDDQQ GSYFGPSSTN SFQSTTPTTT NNFNNGQPST
      541 GFQSTTGMPT TNDQSGFIAS STMDPNMPQA QYPSQQEIMT ATGQQSDQSN SANMVSTPAP
      601 QFPSQQELGA TSQNTQPTPV PQFPAQQDLG STAGQNGNFN GQQNGGGFTQ QAAGVTPQFP
      661 SQQELIQRDQ QNIGVTGQPV NDAGFTPQYG DMNTQYGRYA SSTASSNPQF DQPSADQQQP
      721 QNSARSNLQV LIATSLLMIF VW
//