LOCUS       SIT99218.1               247 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 possible
            transposase (fragment) protein.
ACCESSION   LT708304-630
PROTEIN_ID  SIT99218.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB0622"
                     /note="Mb0622, -, len: 247 aa. Equivalent to Rv0606, len:
                     247 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 247 aa overlap). Possible truncated
                     transposase for IS_1536 element, highly similar to
                     N-terminus of other transposases from Mycobacterium
                     tuberculosis e.g. YX16_MYCTU|Q10809|Rv2885c|MT2953|MTCY274
                     .16c PUTATIVE TRANSPOSASE from Mycobacterium tuberculosis
                     (460 aa), FASTA scores: opt: 1368, E(): 0, (83.5% identity
                     in 237 aa overlap); Rv2978c, Rv0922, Rv3827c, etc. Also
                     similar to N-terminus of MTV002_57|Rv2792 RESOLVASE from
                     M. tuberculosis (193 aa), FASTA score: (87.4% identity in
                     238 aa overlap). Mb0622 found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="InterPro:IPR021027"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3XVV9"
BEGIN
        1 MPRLEIPNGW CVQAFRFTLD PTAEQAHALA RHFGARRKAY NWTVAQLKAD IQAWRATGAQ
       61 TAKPSLRVLR KRWNTVKDEV CVNAETGTVW WPECSKEAYA DGIAGAVDAY WNWQQRRAGK
      121 RDGKRMGFPR FKKKGRDADR VSFTTGAMRV EPDRRHLTLP VIGCVRTHEN TRRIERLIAK
      181 DRARVLAITV RRNGTRLDAS VRVLVQRPQQ PNVELPESRI GVDVGVRRLA TVATADGACC
      241 PVLVPDG
//