LOCUS RID52123.1 1395 aa PRT CON 13-SEP-2018 DEFINITION Brassica rapa hypothetical protein protein. ACCESSION CM010635-2938 PROTEIN_ID RID52123.1 SOURCE Brassica rapa (field mustard) ORGANISM Brassica rapa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica. REFERENCE 1 (bases 1 to 23189089) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE WGS assembly of Brassica rapa FPsc JOURNAL Unpublished REFERENCE 2 (bases 1 to 23189089) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE Direct Submission JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell Drive, Walnut Creek, CA 94598, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Meraculous v. May_2013 Assembly Name :: Brassica_rapa_FPsc_v1.3 Genome Coverage :: 155x Sequencing Technology :: Illumina Hiseq ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Brassica rapa" /mol_type="genomic DNA" /cultivar="FPsc (B3)" /db_xref="taxon:3711" /chromosome="A8" protein /locus_tag="BRARA_H02744" /db_xref="Phytozome:Brara.H02744" intron_pos 79:0 (1/31) intron_pos 93:0 (2/31) intron_pos 126:2 (3/31) intron_pos 153:0 (4/31) intron_pos 183:2 (5/31) intron_pos 235:0 (6/31) intron_pos 367:0 (7/31) intron_pos 403:0 (8/31) intron_pos 435:0 (9/31) intron_pos 482:0 (10/31) intron_pos 511:2 (11/31) intron_pos 556:2 (12/31) intron_pos 611:0 (13/31) intron_pos 641:0 (14/31) intron_pos 703:0 (15/31) intron_pos 724:0 (16/31) intron_pos 745:0 (17/31) intron_pos 765:0 (18/31) intron_pos 816:0 (19/31) intron_pos 844:0 (20/31) intron_pos 903:0 (21/31) intron_pos 938:2 (22/31) intron_pos 1010:0 (23/31) intron_pos 1044:2 (24/31) intron_pos 1089:0 (25/31) intron_pos 1131:0 (26/31) intron_pos 1168:0 (27/31) intron_pos 1201:0 (28/31) intron_pos 1259:0 (29/31) intron_pos 1290:0 (30/31) intron_pos 1328:2 (31/31) BEGIN 1 MSNSLVHNLL NRALIRPPHH TKLNSSCLQP VGKISRSNLS TQLYGKGLHK SGRRLLTESG 61 RPVSFVTKAV LAMDPASQAV EKFNLDGNID LLVEVTSTNV REVNIQIAHT SDSLLLHWGA 121 IRDNKEKWVL PSRSPDRTIN YKSRALRTPF VKSGGNSYLK LEIDDHAIQA IEFLIFDESR 181 NKWYKNNGQN FHINLPMGSN VERNVSVPED LVQVQAYIRW ERNGKQNYSP EKEKEEYEAA 241 RTELREEMMR GASVEDLRRK LLKKDDSSDS PESKEASSSG QESEKRVSKQ PKQKKHFSSE 301 KIQRKGRDLD TLICKHVADV VESKSKSSSE PRALTTLEMY AKAKEEQEST PVFSKKTFKL 361 EGSMILVLVT KLSGKTKIHL ATDYKEKITL HWALSQKGGE WLDPPSDILP PNSLPVRGAV 421 DTQLTIASTD LPSPVQTFEV EIEGDSYKGM PFVLKAGERW IKNSGSDFYV DFAKEEKHVQ 481 KDYGDGKGTA KNLLDRIADL ESEAQKSFMH RFNIAADLVD EAKNAGQLGF AGILVWMRFM 541 ATRQLVWNKN YNVKPREISK AQDRLTDVLQ EVYASYPEYR ELLRMIMSTV GRGGEGDVGQ 601 RIRDEILVIQ RNNDCAGGMM EEWHQKLHNN TSPDDVVICQ ALMDYVKSDF DMSVYWKTLN 661 DNGITKERLL SYDRAIHSEP SFRREQKDGL LRDLGHYMRT LKAVHSGADL ESAIQNCMGY 721 QDDGEGFMVG VQINPVSGLP SGYPDLLRFV LQHVEEKNVE PLLEGLLEAR QELRPLLLKS 781 HDRLKDLLFL DLALDSTVRT AIERGYEQLN NAGPEKIMYF ISLVLENLAL SSDDNEDLIY 841 CLKGWQFALN MFKSKKDHWA LYAKSVLDRS RLALQSKAES YLEILQPSAE YLGSCLGVEQ 901 WAVSIFTEEI IRAGSAAALS SLVNRLDPVL RKTANLGSWQ VISPVEVVGY VIVVDELLTV 961 QNKTYDRPTI IVAKRVRGEE EIPDGAVAVL TPDMPDVLSH VSVRARNGKI CFATCFDSGI 1021 LSDLQAMDGK VLSLKPTSAD VVYREVNDSE VSSQSSDNLE DVPPSISLVK KQFVGRYAIS 1081 SEEFTNDLVG AKSRNIGYLK GKVPSWVGIP TSVALPFGVF EKVLSEKANQ AVSEKLQVLK 1141 KSLDEGNQGA LGEIRKTVLG LVAPAELVEE LKSTMKSSDM PWPGDEGEQR WEQAWSAIKK 1201 VWASKWNERA YFSTKKVKLD HDYLCMAVLV QEVINADYAF VIHTTNPSSG DSSEIYAEVV 1261 KGLGETLVGA YPGRSLSFIC KKNNLDTPLL LGYPSKPIGL FIRRSIIFRS DSNGEDLEGY 1321 AGAGLYDSVP MDEEDKVVLD YTTDPLITDE SFQQKILSDI ARAGDAIEKL YGTPQDIEGV 1381 IRDGKLYVVQ TRPQV //