LOCUS RID49234.1 1790 aa PRT CON 13-SEP-2018 DEFINITION Brassica rapa hypothetical protein protein. ACCESSION CM010635-49 PROTEIN_ID RID49234.1 SOURCE Brassica rapa (field mustard) ORGANISM Brassica rapa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica. REFERENCE 1 (bases 1 to 23189089) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE WGS assembly of Brassica rapa FPsc JOURNAL Unpublished REFERENCE 2 (bases 1 to 23189089) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE Direct Submission JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell Drive, Walnut Creek, CA 94598, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Meraculous v. May_2013 Assembly Name :: Brassica_rapa_FPsc_v1.3 Genome Coverage :: 155x Sequencing Technology :: Illumina Hiseq ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Brassica rapa" /mol_type="genomic DNA" /cultivar="FPsc (B3)" /db_xref="taxon:3711" /chromosome="A8" protein /locus_tag="BRARA_H00047" /db_xref="Phytozome:Brara.H00047" intron_pos 64:1 (1/17) intron_pos 134:0 (2/17) intron_pos 190:1 (3/17) intron_pos 239:1 (4/17) intron_pos 280:0 (5/17) intron_pos 317:2 (6/17) intron_pos 364:1 (7/17) intron_pos 419:2 (8/17) intron_pos 741:0 (9/17) intron_pos 792:0 (10/17) intron_pos 811:1 (11/17) intron_pos 856:0 (12/17) intron_pos 897:2 (13/17) intron_pos 1012:0 (14/17) intron_pos 1073:1 (15/17) intron_pos 1240:1 (16/17) intron_pos 1748:1 (17/17) BEGIN 1 MGKFEIIEEV EGDRVGTTDY YFDRIGEPLS IKEEDAQYDL ENPPSQPLAI SERRGLVFIA 61 HSSGFLVGRT KDVIAASKNS DGKGSRVCVQ EIALVDVPVG DVRILSLSAD DSILAASVDA 121 EIHFFSVDSL LKKDAKPSFS YSPDESGFVK DFRWTRKDKH SYLVLSSNGK LFHGTDSAPP 181 KHVMDGVDAV EWSSKGSYIA VAQDNSLRIL SSKFNEKRCI ALSFDSWIGD SDEDCVVKVD 241 SIKWIRQNCI LLGCFQLIDG MEENYLVQVI RSPDGKITDG SSNLVALSFS DLFPCSMDDL 301 VPVGVGPHLL FSYVDQCKLA ITANRKSIDE HIVLLNWSPG DDESAVSVVD IDRETFLPRI 361 GLQENGDDNM IMGLCVDMVS VEGTVNVRSG GDELKELPPF CVLACLTLEG KLVMYNVASV 421 SGLPDSSDVD LASSSDIEDA YAPSVGDDLP GQSSEESEQQ RKFNFSVQNE QKHLNSENSV 481 SLLPTEQRFP KEEISKKETE SVKSSVSGDN NVKQEPYAGK LLQAADGQQS MIPRQFGTSF 541 VQPPSSVGFE TKKFAGFGHI FPVPDKPQKD ISEQSKSMNF QTRFGSKSTP GLFAFSGPQN 601 ASVTPPQNTP AQLWSSGKGV SPPSFGSGLF PSVKDTQQKQ PEQTGTGYVN PPTCIRENPV 661 QAIETTRASA LSILTPPLGQ SQDADEGVEK IDPLPSIRAS QLSLQVKSSF EKSSNHQQHK 721 TPLNAGPLRL EHAMSKQTSN INEMAREMDA LLQSIEGPGG FKDSCTSLLT GHIEELEQGL 781 EILAGKCQTC KIITHEQQGE IQHLLDKTIQ VLAKKTYMEG MYKQTSDDQY WQLWNRRRLN 841 PELEAKRQHI VKLNKDLTHQ LIELERYFNR LELDRYQDDG GLPLSRRGVP NRSAPSRRVQ 901 SLHSLHNTMS SQLAAAEQLS DCLSKQMTFL KIDSPVKKNV KQELFETIGI PYDTSFNSPD 961 AVKANNASSA KNLLLSSIPA SINAQSKQRQ SSGTKSSDPE TARRRRESLD RNWAAFEPPK 1021 TTVKRMLLQE QQKSGTNQPI VSSERLRPKV DTQEQSLLRL KDHASPVVSS NKGIMKSFQQ 1081 NTSEAQSTPF KSTRAMPQSN SPFNHSSASA SKPSFNWSGN KSNSIASYAE ESAPSQSKDT 1141 KTPTVFEQTE KKAGGFKLPE GKANMFPDRS AGSVQRPTGA PVQSQFSFNT NSSMPGNRLT 1201 FPAATVSASS SPLSSTSLDS VSTLPTPSSR SLPTSTKDSV SAPTSIPISL ASVPQTLSVA 1261 PTSTVSATGI SVPFGKSLTS ASLDLNQAAT STPSPSPGPT AGFSFKLPAS SPSSPEIVSS 1321 STGQSSVVPP SSTASQVSTS LVSATSSPTD SNRLFSSTSS SLTPPITSTA PGVFKFPQVS 1381 TPSSAVSTAE PVSEPKKLET QSSSILSTGS TAEPVAKAAT SQTELLPVKS EILTSETTVT 1441 APVSTSGFLS GFSSATQSSP VSMAPPSFSW PGSSQPQQPS PTPVSFPTSF STSASPLGEK 1501 KDTVDTQEDE MDEEAPEASP AAELSMSGFG GFGLGSTPNP AAPKSNPFGG SFGNATTATS 1561 NLFNLTVPSG ELFRPASFSF QNPQPSQPTG FGGFSTTPSQ TPTQGGFGQP SQVGVGQQAL 1621 GSVLGSFGQS RQIGAGLPGA TFGSPTGFGG SSPGSGLPNA PASGGFAAAG SSATGGFAAM 1681 ASTGRGFAGA SSSPTGGFAG LASGSGGFGG AAPGGGAGGG FGGVGSGSGG FGSFAPPNSG 1741 GFAGASGGGG FGGFGGQGQG QGGGGGFSGF GGNTGGAGGK PSELFTQMRK //