LOCUS RID46478.1 1449 aa PRT CON 13-SEP-2018 DEFINITION Brassica rapa hypothetical protein protein. ACCESSION CM010636-3363 PROTEIN_ID RID46478.1 SOURCE Brassica rapa (field mustard) ORGANISM Brassica rapa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica. REFERENCE 1 (bases 1 to 44888295) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE WGS assembly of Brassica rapa FPsc JOURNAL Unpublished REFERENCE 2 (bases 1 to 44888295) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE Direct Submission JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell Drive, Walnut Creek, CA 94598, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Meraculous v. May_2013 Assembly Name :: Brassica_rapa_FPsc_v1.3 Genome Coverage :: 155x Sequencing Technology :: Illumina Hiseq ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Brassica rapa" /mol_type="genomic DNA" /cultivar="FPsc (B3)" /db_xref="taxon:3711" /chromosome="A9" protein /locus_tag="BRARA_I03135" /db_xref="Phytozome:Brara.I03135" intron_pos 28:0 (1/18) intron_pos 131:1 (2/18) intron_pos 173:0 (3/18) intron_pos 287:0 (4/18) intron_pos 456:0 (5/18) intron_pos 514:0 (6/18) intron_pos 576:1 (7/18) intron_pos 609:2 (8/18) intron_pos 712:0 (9/18) intron_pos 744:2 (10/18) intron_pos 786:2 (11/18) intron_pos 882:0 (12/18) intron_pos 916:0 (13/18) intron_pos 938:0 (14/18) intron_pos 1042:1 (15/18) intron_pos 1084:0 (16/18) intron_pos 1197:0 (17/18) intron_pos 1366:0 (18/18) BEGIN 1 MAYDQSLHSP DNPHFFQPLL PGFHTHLNIP VAFFLKHVQG SNDQIKTAKL TTDASAKTWL 61 VKVDGVRLTD GWEDFAVGHD LRIGDITIFR HEGEMVFHVT AFGPSCCDIQ YTSASSHSIN 121 DDSQDQTNNA GNSSGEKRKR VKKNPRTKED SSSDHSQFVA HVSPSSLSSD RLYIPTGFAR 181 SNGLDNMSGK EIIVLLNEEG RSWSLDMTCN KVGMQTFVRP GWRRFCAENG MKKGHHYTFK 241 LVRRSAPLII RLSHAEHEPE PATESSLNHS YYVGSVSSNS LSTDKLYLQR HFVTANGLEK 301 GLSEITLKNE WGGSWILGFR HYEPQNHTYL GPGWKTFCQV NGIKAEDSFM FKLVETGDKP 361 VLLLCTSNRG KTPLDCSEDR DDVDSLSSDT SSEDDSKEES QESDKESIED ADRSQQCIVM 421 EKENNSLRCI CSSPYSKHRF VRLSLTQSAL KTSVLYLPLA FTRMNCINKP IKIMLLGKDG 481 VKKQVVDLLK NKSTGAMRFG KGWREFCDAH GVKAWAFGSQ SNFGFVHLGL SFSDLSKSAL 541 FSLYESLVWD RFRFYRIRVR ISKSLKNRFF DLKVPGPVET ATQEDRLVEK LKPELSNRTE 601 KVYPFIERRY IIMRTSKGPM NPPELLCDLA KINETMSISE LCLPELSREL IISAVIIVSL 661 AQKVIISNPK TSQRTVVCGC GKSPAVSKRP TIENGGASGG EPEQSAHLAG QHMSSQHRWR 721 NEMEKVWMEE EAVSGEDLRT QSLESRSHST KEHAERRSSG KEYEERRTRL TLLSGNPQIS 781 GQHKRRTLEP KRFETVAVMV ETNNAAVASE MNGAAVAAEM NGTAAAMERE ADLKRGIKGD 841 GRRRRRRARS LPASTKLRRN GASISVAGRD ELGRTSLHKY LQRLFTKING SKKQRNVILL 901 DRHGFLDKTI KFLEKPLLPG FHTYLVLLTL FLCSKHVNIP VAFFSKHVEG SNDHIKTAKL 961 RTDASAKTWL VEMDGLKLTD GWEDFAVAHD LRIGDIIIFR HEGKMVFHVT AFGPSLCEFQ 1021 YTSASSHNIN DVSDDDHTNK TGNSSGEKRK RVKKNPRTKE ESSSDHSHFV AHVTPSSLSC 1081 DRLYVPKGFA MSNGLDNMSG KEIVLLNEEG KSWNLNITYN ESGMHTFVRP GWRRFCAENG 1141 ISQGHHCTFE LVPKSAPPVL RLSRAEHVPK PAPESSLHHS YYVGSVSSNS LRIDKLYLQM 1201 KFVTANGMKK GFSEIILKNE WGGRWSVRLR HYASSNHTYL GPGWKTFCQV NGIKAGDPFM 1261 FKLVETGDKP VLLLCSSNRG ETPLECSEDS DDVNSLSSDT SSGDDSREES QESEEESLQD 1321 DSSSKDCVEM EKRKSSLRCK CSSSYSKHRF VRLTLTQNAL KTSVQHLPLG FTRVNGINRS 1381 RKIMLLGKDG VKKWVVDLLK NKSTGAMRIR KGWRELCDAH GVKVGQSFLL ELIWEDKEAI 1441 PVLKFCTKL //