LOCUS RID46133.1 1612 aa PRT CON 13-SEP-2018 DEFINITION Brassica rapa hypothetical protein protein. ACCESSION CM010636-3018 PROTEIN_ID RID46133.1 SOURCE Brassica rapa (field mustard) ORGANISM Brassica rapa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica. REFERENCE 1 (bases 1 to 44888295) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE WGS assembly of Brassica rapa FPsc JOURNAL Unpublished REFERENCE 2 (bases 1 to 44888295) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE Direct Submission JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell Drive, Walnut Creek, CA 94598, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Meraculous v. May_2013 Assembly Name :: Brassica_rapa_FPsc_v1.3 Genome Coverage :: 155x Sequencing Technology :: Illumina Hiseq ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Brassica rapa" /mol_type="genomic DNA" /cultivar="FPsc (B3)" /db_xref="taxon:3711" /chromosome="A9" protein /locus_tag="BRARA_I02815" /db_xref="Phytozome:Brara.I02815" intron_pos 112:0 (1/26) intron_pos 171:2 (2/26) intron_pos 185:0 (3/26) intron_pos 237:1 (4/26) intron_pos 275:2 (5/26) intron_pos 302:2 (6/26) intron_pos 311:0 (7/26) intron_pos 330:0 (8/26) intron_pos 352:0 (9/26) intron_pos 377:0 (10/26) intron_pos 413:0 (11/26) intron_pos 458:0 (12/26) intron_pos 493:2 (13/26) intron_pos 525:0 (14/26) intron_pos 581:0 (15/26) intron_pos 628:0 (16/26) intron_pos 695:0 (17/26) intron_pos 728:0 (18/26) intron_pos 779:0 (19/26) intron_pos 897:2 (20/26) intron_pos 958:0 (21/26) intron_pos 1066:0 (22/26) intron_pos 1318:1 (23/26) intron_pos 1359:0 (24/26) intron_pos 1441:0 (25/26) intron_pos 1490:2 (26/26) BEGIN 1 MGFEALAWYC KPVAQGFWEK TVDGAFGAYT PCVVNTLVML VSQIVLLGLC LYRIWIIFRN 61 AKAQLYVLRN KYYNCVQGIL ACYCGAEPVL RLVMRVSLFS MDEETYLPPF EVASLTVEAF 121 AWLSMLSLVG LETKRYVKEF RWYVRFGVVY VLVADAVLLD LVLPLNNSLN RTALYLCISS 181 RCAQVLFGVM LLVYIPELDP YQGYHTLNNE SIDNVEYDVL PEGENICPER RAGFFTGIFF 241 DWITPLMQLG YRKTLNEKDV WQLDKWDQTE TLIKRFQRCW IEESRRSKPW LLRALNKSLG 301 GRFWFGGIFK IGHDLSQFVG PLILSQLLRA MQEDDPAWVG YVYAFLIFVG VTLGVLCQSQ 361 YFQHVGRAAF RLRSTMVAAV FHKSLRLTHE ARKNFTSGKV TNMITADASA LQLIVEQLHG 421 LWSAPFRIIM SIILLYQQLG VASLFGSLIL FLLIPLQTLV INKMRKLTKE GLQWTDKRVG 481 ITNEILASMD TVKCYAWEKS FESRIEGIRN EELSWFRKAQ LLSAFNSFIL NSTPVVVTVV 541 SFGVFVLLGG DLTPARAFSS LSLFSVLRSP LNMLPNLLSQ AVNANVSLQR IEDLLLSEER 601 VLAHNQPLQP GAPAISIKNG YFSWDSKTTN PTLSNINLEI PVGSLVAIVG GTGEGKTSLV 661 SAMLGELSHG ETSNVVIRGS VAYVPQVSWI FNATVRENII FGSDFERERY WRAIDVTALQ 721 HDLDLLPGRD LTEIGERGVN ISGGQKQRVS MARAVYSNSD VYIFDDPLSA LDAHVAQQVF 781 DSCMKEELKG KTRILITNQL HLLPMMDRII LVSEGMIKEE GTFEELSGNG SLFQKLMENA 841 GKMDATQEMN KFDDEKIPTV NVEIKLGSTK QGEDGRSVLV KKEERESGII SWNVLTRYKN 901 AVGGLWVVLI LLACYVTTEA LRLTSCTWLS FWTDQSTSKS YSTGFYIVMF ALFGFGQVAV 961 TFTNSFWLLT SSLHAAKTLH DAMLNSILRA PMLFFDTNPT GRVINRFSKD IGDIDRIVAN 1021 LMNMFMSQLW QLLSTFALIG AVSTISLWAI MPLLILFYAA YLYYQNTSRE VRRMDSVARS 1081 PIYAQFGEAL NGLSSIRAYK AYDRMAKING KSVDNNIRFT LANTTCNRWL TIRLETLGGV 1141 MIWLTATFAV MRSSNTENQA DFASTMGLLL SYTLNITTLM SGVLRQASKA ENSLNSVERV 1201 GNYIDLPSEG AEIIESNRPV PGWPSRGSIT FEDVHLRYRP GLPIVLHGLS FSVSPNEKVG 1261 VVGRTGAGKS SVLNALFRIV EVEKGRIMID DYDVAKFGLT DLRRVLSIIP QSPVLFSGTV 1321 RFNIDPFDEH NDADLWEALQ RAHMKDVIAR NPLGLDTEVS EGGENFSVGQ RQLLSLVRAL 1381 LRRSKILVLD EATASVDVRT DTLIQRTIRE EFKSCTMLVI AHRLNTIIDC DKILVLSSGQ 1441 ALEYDSPQEL LSRDTSAFFG MVHSTGLANA QHLCNLVFGG REVNGRRQEG FKSAKDSGGD 1501 EFSGEIGRRC RVVRRDPTKL RRDSTKLRRD STKLRREARS LANSMNSGEL GKLRRTRRSP 1561 ANSVMYSELG DLLANSAIFD ELDETPSKTE RAIVMEISEE EDDSVYIETI HI //