LOCUS RID41784.1 1626 aa PRT CON 13-SEP-2018 DEFINITION Brassica rapa hypothetical protein protein. ACCESSION CM010637-1867 PROTEIN_ID RID41784.1 SOURCE Brassica rapa (field mustard) ORGANISM Brassica rapa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica. REFERENCE 1 (bases 1 to 19914974) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE WGS assembly of Brassica rapa FPsc JOURNAL Unpublished REFERENCE 2 (bases 1 to 19914974) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE Direct Submission JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell Drive, Walnut Creek, CA 94598, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Meraculous v. May_2013 Assembly Name :: Brassica_rapa_FPsc_v1.3 Genome Coverage :: 155x Sequencing Technology :: Illumina Hiseq ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Brassica rapa" /mol_type="genomic DNA" /cultivar="FPsc (B3)" /db_xref="taxon:3711" /chromosome="A10" protein /locus_tag="BRARA_J01716" /db_xref="Phytozome:Brara.J01716" intron_pos 43:0 (1/15) intron_pos 80:2 (2/15) intron_pos 758:2 (3/15) intron_pos 868:0 (4/15) intron_pos 940:0 (5/15) intron_pos 964:1 (6/15) intron_pos 1033:0 (7/15) intron_pos 1054:0 (8/15) intron_pos 1123:2 (9/15) intron_pos 1161:0 (10/15) intron_pos 1323:0 (11/15) intron_pos 1422:2 (12/15) intron_pos 1504:0 (13/15) intron_pos 1528:2 (14/15) intron_pos 1574:0 (15/15) BEGIN 1 MRGEVCFDCL EQRIKSDFSD QIVFSYGLSD SPLPFGSSAV VKVSDSSEEG VSASEFDSSS 61 SQFVLEYLRK EEHGCLVNYV ERLGNSNDDV DCDENLICSH FKATNGRELG LGTEDISCES 121 SGSFSSRRAL AALLPIAQIS KCSASHLQKL ASSFLSECPE DYILASLNRL IDGKSSGQET 181 ESFLRLIGLP LLEEESDLPC LRHPNLSPVL GVLTSSDCLV SVLPKAPFTL ENILYYSPRA 241 LKSEWHRNFI VYQLLSVLAH LHGLGISHGD IRPSNIFLSD SLWSWLKIYS KPGLGSGDAS 301 SSASRKSLCV EGCYYSGLYA DLKISSHLDW QTIFDKWWKG EASNFEYLLF LNKLAGRRWG 361 DHTFHPVMPW VIDFSKKPEK DSDSGWRDLR KSKWRLAKGD EQLDFTYSTF EIPHHVSDEC 421 LSELAVCSYK ARRLPLSVLR KAVRSVYEPN EYPSDMQRLY DWTPDECIPE FYCDSRIFCS 481 LHPSMSDLAV PPWASSPEEF IRLHRDALES PHVSSRLHHW IDITFGYKMS GQAAITAKNV 541 MLSSSEPAAP RSVGRRQLFF RPHPVRLRFS REKEQSRNEQ EMHTFHGFGV DNNRSVILEA 601 DEYLEETEEA SAFSEHASHL SPKYHLYQNL DESPLHESCS ENTNKADTSL SGTSRNKGVP 661 SDICLNYLLE HIDVRDEVSI EPQELLLWRQ DFCLGKAIAE DIFSIGCVLA ELYLMRPLFN 721 SVSLATYLEG GDLPELIKEL PPLTKVLVEA CIERDWRRRP SAKSLLNSPY FSATVKSAYL 781 FAAPLHLLAK GGTRLYYAAS FAKQGALKAM GSFVAEMCAA YCLPLVTTLL SDNECEWAYV 841 LIKEFTKYLT PVAVQRLVLP SIQKILLTTG YSHLKVSLLQ DSFVRELWTR IGKRVYLEMI 901 HPLVISNLYN SPDKISASAA SVLLIGSSEE LGAPVTVHQT ILPLINYFGK GIRTDGIEVL 961 VRIGRLLGVN YIVKQMMPLL EHVVCFCIDL SSMKKPEPVH SWCSLALTDC LITLDGLVAL 1021 IPDELLIHEL TKGRLCLHVR VLMQKNLELR VLQFAATSLM SICQRIGQEL TALHVLPQLK 1081 ELFDEFAFSE KSTDVSDSLN WKIRTTERNS HPESPIKSRM DLVLLLYPSF ASLLGMEKLR 1141 QGCPTWLLLE QYLLKHHNWK WEYTGRSSRY NMETKPVLSK GPASKHTPKT LLNGSGRVVP 1201 QSQGLRNSNH LKPHIHDPVE GQEEVLSPLV HEPWSWFPSP VACWDGLDIG RFGNPKDEQR 1261 WKIRASVLSS AHAHRGALRS LVVSEDECTV FTSGIDPGFK GSVQKWELAS LSCVSGYHAH 1321 EEVVNDISIL SSTGKIASCD GTIHVWNSQT GKLIHLFSES PADQDQDQAS SYLSSNNNSN 1381 QSNRHVSHGL SNGIFDGNMY TCMHYLEYMD QLVVGTGSGA LRFIDLARGQ KLQLWSGESF 1441 ESGSTSLVSA LCSGGSHTKQ GDGASVSPSW IAAGFSSGQC KLFDVRESGV ISSWRAHDGY 1501 VTKLAAPESH LLVSSSLDKT LRIWDLRKSW TPEPFVVKGH CDGVSGFSIW GKDVISISRN 1561 NIGVFSLSKS QDEDEQQQQH QRIIPQKLYM TEKGGRVRSD LSTICVLPFS RLFIVGAHDG 1621 YLRICC //